RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ANKDD1BA6NHY2 528 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ANHXE9PGG2 379 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 DYRK3O43781 588 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 SSX4O60224 188 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TPST2O60704 377 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 PDE9AO76083 593 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 DLGAP3O95886 979 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 CKMT1AP12532 417 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 POU1F1P28069 291 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TIE1P35590 1138 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 FEN1P39748 380 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 MANFP55145 182 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 SPHARQ15513 63 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 HNRNPA1L2Q32P51 320 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 FLYWCH1Q4VC44 716 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ERN2Q76MJ5 926 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 AKAP14Q86UN6 197 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 C2orf73Q8N5S3 287 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 C12orf76Q8N812 135 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 FAM181AQ8N9Y4 354 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TP53I13Q8NBR0 393 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 FLCNQ8NFG4 579 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ASB15Q8WXK1 588 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 UCN3Q969E3 161 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 SLC30A2Q9BRI3 323 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 AICDAQ9GZX7 198 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 NUAK2Q9H093 628 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 MVB12BQ9H7P6 319 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 SMURF1Q9HCE7 757 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 MAN2C1Q9NTJ4 1040 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 NDUFB11Q9NX14 153 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 DNAJC27Q9NZQ0 273 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 SEC14L4Q9UDX3 406 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TESQ9UGI8 421 aaKnown RBP11.78□□□□□ -0.52
BEST3-201ENST00000266661 ADAM29Q9UKF5 820 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 TMCC3Q9ULS5 477 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 ASF1AQ9Y294 204 aa11.78□□□□□ -0.52
BEST3-201ENST00000266661 PLXND1Q9Y4D7 1925 aa11.77□□□□□ -0.52
BEST3-201ENST00000266661 A0A1W2PRQ8 180 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 C5orf58C9J3I9 102 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 ZNF670-ZNF695F2Z2N8 137 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 SLC9A3R1O14745 358 aaPredicted RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 SOX14O95416 240 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 EIF2S1P05198 315 aaKnown RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 GSTT2P0CG29 244 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 GSTT2BP0CG30 244 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 ADH5P11766 374 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 ADRB3P13945 408 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 MAGP20916 626 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 GSTM5P46439 218 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 XKP51811 444 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 IFITM2Q01629 132 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 HEPACAMQ14CZ8 416 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 SPANXN2Q5MJ10 180 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 TMEM53Q6P2H8 277 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 C17orf64Q86WR6 236 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 CLIP4Q8N3C7 705 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 AMER3Q8N944 861 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 PLA2G15Q8NCC3 412 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 TFGQ92734 400 aaPredicted RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 RSPRY1Q96DX4 576 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 TEFMQ96QE5 360 aaKnown RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 KCNS3Q9BQ31 491 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 POLDIP3Q9BY77 421 aaKnown RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 PITHD1Q9GZP4 211 aaPredicted RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 LMAN2LQ9H0V9 348 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 DDX31Q9H8H2 851 aaKnown RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 PRM3Q9NNZ6 103 aa11.77□□□□□ -0.53
BEST3-201ENST00000266661 MRPS18AQ9NVS2 196 aaKnown RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 RPL36Q9Y3U8 105 aaKnown RBP11.77□□□□□ -0.53
BEST3-201ENST00000266661 HYKKA2RU49 373 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 CEBPBP17676 345 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 POU3F3P20264 500 aaPredicted RBP11.76□□□□□ -0.53
BEST3-201ENST00000266661 LTBRP36941 435 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 SOX3P41225 446 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 SMIM11AP58511 58 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 CDK5Q00535 292 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 MLLT11Q13015 90 aaPredicted RBP11.76□□□□□ -0.53
BEST3-201ENST00000266661 ZNF79Q15937 498 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 SYPL1Q16563 259 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 TMC5Q6UXY8 1006 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 ADAMTSL4Q6UY14 1074 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 SPATC1Q76KD6 591 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 BCDIN3DQ7Z5W3 292 aaKnown RBP11.76□□□□□ -0.53
BEST3-201ENST00000266661 ZER1Q7Z7L7 766 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 MRGPREQ86SM8 312 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 PHC2Q8IXK0 858 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 MORN4Q8NDC4 146 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 OR5K2Q8NHB8 316 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 GPA33Q99795 319 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 TREX2Q9BQ50 279 aaPredicted RBP11.76□□□□□ -0.53
BEST3-201ENST00000266661 AIF1LQ9BQI0 150 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 CNPPD1Q9BV87 410 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 ACAT2Q9BWD1 397 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 TSSK6Q9BXA6 273 aa11.76□□□□□ -0.53
BEST3-201ENST00000266661 POLR2J3Q9H1A7 115 aaKnown RBP11.76□□□□□ -0.53
BEST3-201ENST00000266661 BCL2L10Q9HD36 194 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms