RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SH2D2AQ9NP31 389 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 CREBBPQ92793 2442 aa14.84□□□□□ -0.03
USE1-201ENST00000263897 C1orf226A1L170 272 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 FAM166BA8MTA8 275 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 FOXO6A8MYZ6 492 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 ACOT7O00154 380 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 SHBGP04278 402 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 FBXO45P0C2W1 286 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 CPMP14384 443 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 SERPINB3P29508 390 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 SSTR4P31391 388 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 DNASE1L1P49184 302 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 NR0B1P51843 470 aaKnown RBP14.83□□□□□ -0.04
USE1-201ENST00000263897 FOXO1Q12778 655 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 EBPQ15125 230 aaKnown RBP14.83□□□□□ -0.04
USE1-201ENST00000263897 HYAL4Q2M3T9 481 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 SLC48A1Q6P1K1 146 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 ARHGAP11AQ6P4F7 1023 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 C3P1Q6ZMU1 363 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 SLC22A16Q86VW1 577 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 GALNT12Q8IXK2 581 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 DND1Q8IYX4 353 aaKnown RBP14.83□□□□□ -0.04
USE1-201ENST00000263897 EID3Q8N140 333 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 C1orf52Q8N6N3 182 aaKnown RBP14.83□□□□□ -0.04
USE1-201ENST00000263897 PAQR8Q8TEZ7 354 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 PHF10Q8WUB8 498 aaKnown RBP14.83□□□□□ -0.04
USE1-201ENST00000263897 TP53INP1Q96A56 240 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 SPACA9Q96E40 222 aaPredicted RBP14.83□□□□□ -0.04
USE1-201ENST00000263897 GAL3ST4Q96RP7 486 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 DMRTA2Q96SC8 542 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 HBEGFQ99075 208 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 IL1RL2Q9HB29 575 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 PSME2Q9UL46 239 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 EMCNQ9ULC0 261 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 STK38LQ9Y2H1 464 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 HRH3Q9Y5N1 445 aa14.83□□□□□ -0.04
USE1-201ENST00000263897 CACNA1CQ13936 2221 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 C2orf92A0A1B0GVN3 265 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 G3V2L1 256 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 HNRNPRO43390 633 aaKnown RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 TPOP07202 933 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 CT62P0C5K7 136 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 CHN1P15882 459 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 S1PR1P21453 382 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 HTR1EP28566 365 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 GRNP28799 593 aaKnown RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 HMOX2P30519 316 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 DEKP35659 375 aaKnown RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 PIGAP37287 484 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 PKNOX1P55347 436 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 TRA2BP62995 288 aaKnown RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 CSTF3Q12996 717 aaKnown RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 LCP2Q13094 533 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 ZNF630Q2M218 657 aaPredicted RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 NCCRP1Q6ZVX7 275 aaPredicted RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 TDRPQ86YL5 185 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 ZNF615Q8N8J6 731 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 GBP7Q8N8V2 638 aaPredicted RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 ZNF441Q8N8Z8 693 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 UBLCP1Q8WVY7 318 aaPredicted RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.82□□□□□ -0.04
USE1-201ENST00000263897 CCDC126Q96EE4 140 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 OR10A5Q9H207 317 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 PPCSQ9HAB8 311 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 CHST11Q9NPF2 352 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 TUBA8Q9NY65 449 aaPredicted RBP14.82□□□□□ -0.04
USE1-201ENST00000263897 CNIH4Q9P003 139 aa14.82□□□□□ -0.04
USE1-201ENST00000263897 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 GLRA3O75311 464 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 ESRRBO95718 433 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 ENO1P06733 434 aaKnown RBP14.81□□□□□ -0.04
USE1-201ENST00000263897 CSNK2A2P19784 350 aaPredicted RBP14.81□□□□□ -0.04
USE1-201ENST00000263897 NT5EP21589 574 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 TNFRSF8P28908 595 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 MAGEA5P43359 124 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 SLCO1A2P46721 670 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 CCT5P48643 541 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 MAP4K2Q12851 820 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 HLA-DQA1Q5Y7H0 255 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 ZYG11AQ6WRX3 759 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 CD163Q86VB7 1156 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 TAGAPQ8N103 731 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 MMP21Q8N119 569 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 FAM109AQ8N4B1 249 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 TMEM251Q8N6I4 163 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 CCNYL1Q8N7R7 359 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 FAM13CQ8NE31 585 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 OR7G1Q8NGA0 311 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 MARVELD3Q96A59 401 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 FAIM2Q9BWQ8 316 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 GSTO2Q9H4Y5 243 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 PROK2Q9HC23 129 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 MCM8Q9UJA3 840 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 GRID1Q9ULK0 1009 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 TIMM22Q9Y584 194 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 CHCHD2Q9Y6H1 151 aaPredicted RBP14.81□□□□□ -0.04
USE1-201ENST00000263897 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.81□□□□□ -0.04
USE1-201ENST00000263897 ABCA12Q86UK0 2595 aa14.81□□□□□ -0.04
USE1-201ENST00000263897 SERTM1A2A2V5 107 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 CCDC151A5D8V7 595 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms