RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NT5EP21589 574 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC5A2P31639 672 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 MC3RP41968 323 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 PRKAG1P54619 331 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 HSD17B7P56937 341 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 RPS26P62854 115 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 OCA2Q04671 838 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 EIF3IQ13347 325 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CEACAM7Q14002 265 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SPDYE7PQ495Y7 208 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 COX20Q5RI15 118 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 MRPL14Q6P1L8 145 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 FAM198BQ6UWH4 519 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 C6orf15Q6UXA7 325 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 BNC2Q6ZN30 1099 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 TMPRSS7Q7RTY8 843 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SZRD1Q7Z422 152 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 OR7G2Q8NG99 324 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ADAMTS18Q8TE60 1221 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 ZFP90Q8TF47 636 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 CPPED1Q9BRF8 314 aaPredicted RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC35A5Q9BS91 424 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 THUMPD3Q9BV44 507 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 PNO1Q9NRX1 252 aaKnown RBP9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 TMEM181Q9P2C4 612 aa9.12□□□□□ -0.95
SNRNP40-201ENST00000263694 IGKV3D-11A0A0A0MRZ8 115 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 IGHV3-20A0A0C4DH32 117 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 RNF103-CHMP3A0A140T963 221 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 PRORSD1PA6NEY8 169 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 VSTM2BA6NLU5 285 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 OR10H2O60403 315 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ONECUT2O95948 504 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 NPPAP01160 153 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 IFNA16P05015 189 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 HEXBP07686 556 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ZCCHC18P0CG32 403 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 SLC35E2P0CK97 266 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 NQO1P15559 274 aaKnown RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 CHI3L1P36222 383 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 CCT3P49368 545 aaKnown RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 IGLV3-21P80748 117 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 FOXK1P85037 733 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 MGAT2Q10469 447 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 TP53BP2Q13625 1128 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 EXOSC7Q15024 291 aaKnown RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 MLC1Q15049 377 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 NSDHLQ15738 373 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 DNAL1Q4LDG9 190 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF628Q5EBL2 1059 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ANGPTL8Q6UXH0 198 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF517Q6ZMY9 492 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 WDR53Q7Z5U6 358 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 IFNEQ86WN2 208 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 HPS6Q86YV9 775 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ZFP28Q8NHY6 868 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 MCUR1Q96AQ8 359 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ELP4Q96EB1 424 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 FAM120BQ96EK7 910 aaKnown RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 OTUB1Q96FW1 271 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 C16orf58Q96GQ5 468 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 LRFN5Q96NI6 719 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 SPSB2Q99619 263 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 HOPXQ9BPY8 73 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 ZPBPQ9BS86 351 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 YIPF4Q9BSR8 244 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 TGIF2Q9GZN2 237 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 EPS8L2Q9H6S3 715 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 POLR1BQ9H9Y6 1135 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 TPT1P8Q9HAU6 139 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 PRDM9Q9NQV7 894 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 GPATCH2Q9NW75 528 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 GPN3Q9UHW5 284 aaPredicted RBP9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 L3MBTL1Q9Y468 752 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 PCDHGA3Q9Y5H0 932 aa9.11□□□□□ -0.95
SNRNP40-201ENST00000263694 PIEZO1Q92508 2521 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 BLACEA4D250 179 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 IDSB3KWA1 339 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 UPK1AO00322 258 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 ATP1B1P05026 303 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 DDX5P17844 614 aaKnown RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 TNNI3P19429 210 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 TCN2P20062 427 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 SPINK2P20155 84 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 UQCRC2P22695 453 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 STT3AP46977 705 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 ERFP50548 548 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 PGDP52209 483 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 RPS18P62269 152 aaKnown RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 LIPEQ05469 1076 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 DUSP8Q13202 625 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 ZNF267Q14586 743 aaPredicted RBP9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 PRICKLE4Q2TBC4 344 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 PIGGQ5H8A4 983 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 TMEM164Q5U3C3 297 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 QSOX2Q6ZRP7 698 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 MED25Q71SY5 747 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 C6orf120Q7Z4R8 191 aa9.1□□□□□ -0.95
SNRNP40-201ENST00000263694 RNF130Q86XS8 419 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms