RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 XKR7Q5GH72 579 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 FAM71E1Q6IPT2 247 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 OPN5Q6U736 354 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 LINC00696Q6ZRV3 163 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 GPALPP1Q8IXQ4 340 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 VWA5B2Q8N398 1253 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC15A4Q8N697 577 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 TRIML2Q8N7C3 387 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 FDCSPQ8NFU4 85 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC2A12Q8TD20 617 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 NCLNQ969V3 563 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 PPWD1Q96BP3 646 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 MOAP1Q96BY2 351 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 FBXL20Q96IG2 436 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 SORT1Q99523 831 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 SMAD5Q99717 465 aaKnown RBP11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 C1orf50Q9BV19 199 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 TUBB1Q9H4B7 451 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 CDCP1Q9H5V8 836 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 RMND5AQ9H871 391 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 ERVK-11Q9UQG0 969 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 PCDHGB3Q9Y5G1 929 aa11.72□□□□□ -0.53
CLNS1A-201ENST00000263309 A0A1W2PRB8 838 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 OR2W5A6NFC9 320 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 CEACAM4O75871 244 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 LRATO95237 230 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 KRT16P08779 473 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 S100A3P33764 101 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ANXA11P50995 505 aaKnown RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 SSR4P51571 173 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 AQP5P55064 265 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 CLDN8P56748 225 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 RAE1P78406 368 aaKnown RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 RAPSNQ13702 412 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 KIAA0040Q15053 153 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ACER2Q5QJU3 275 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 FAM47EQ6ZV65 393 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 CPLX4Q7Z7G2 160 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 SIRT6Q8N6T7 355 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 BRIX1Q8TDN6 353 aaKnown RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ELP5Q8TE02 316 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 PTPMT1Q8WUK0 201 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ASB15Q8WXK1 588 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 SLC39A7Q92504 469 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 TTC9Q92623 222 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ZNF764Q96H86 408 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 CCDC28BQ9BUN5 200 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 HHATLQ9HCP6 504 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 TCF7L2Q9NQB0 619 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ACSS1Q9NUB1 689 aaPredicted RBP11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 ANAPC2Q9UJX6 822 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 CCL27Q9Y4X3 112 aa11.71□□□□□ -0.53
CLNS1A-201ENST00000263309 URB1O60287 2271 aaKnown RBP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TRAV17A0A0B4J275 112 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TP53I11O14683 189 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TBX19O60806 448 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 SLC22A3O75751 556 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 IL6P05231 212 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 ITGAMP11215 1152 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 SDC1P18827 310 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 EPHA3P29320 983 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 CLK3P49761 638 aaKnown RBP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 HNRNPFP52597 415 aaKnown RBP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 FOXL2P58012 376 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 C19orf57Q0VDD7 668 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 METTL21CQ5VZV1 264 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 CPZQ66K79 652 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 OGFOD2Q6N063 350 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 LARP4Q71RC2 724 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 SZRD1Q7Z422 152 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 MIER2Q8N344 545 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TMEM178AQ8NBL3 297 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TMEM52Q8NDY8 209 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 NUBPLQ8TB37 319 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 HAS2Q92819 552 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TP53INP1Q96A56 240 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 GAL3ST4Q96RP7 486 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 DUSP26Q9BV47 211 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 C20orf27Q9GZN8 174 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 OR10A5Q9H207 317 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 CXorf21Q9HAI6 301 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 NEUROD4Q9HD90 331 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 ZNF71Q9NQZ8 489 aaPredicted RBP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 DDX18Q9NVP1 670 aaKnown RBP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 CES1P1Q9UKY3 287 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 PPIEQ9UNP9 301 aaKnown RBP11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 ERVK-19Q9WJR5 959 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 HEATR5BQ9P2D3 2071 aa11.7□□□□□ -0.54
CLNS1A-201ENST00000263309 A0A0G2JND7 137 aa11.69□□□□□ -0.54
CLNS1A-201ENST00000263309 MYOCOSA0A1B0GUC4 107 aa11.69□□□□□ -0.54
CLNS1A-201ENST00000263309 A8MVJ9 347 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms