RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 FMO3P31513 532 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 BMP8BP34820 402 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 RAD23AP54725 363 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 EIF2B5Q13144 721 aaKnown RBP12.83□□□□□ -0.36
VMP1-201ENST00000262291 COL19A1Q14993 1142 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 UBXN2BQ14CS0 331 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 LTB4RQ15722 352 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 INAVAQ3KP66 663 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 DEFB134Q4QY38 66 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 LAIR2Q6ISS4 152 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 TMEM107Q6UX40 140 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 PAQR7Q86WK9 346 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 ABCA7Q8IZY2 2146 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 MFSD9Q8NBP5 474 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 VANGL1Q8TAA9 524 aaPredicted RBP12.83□□□□□ -0.36
VMP1-201ENST00000262291 KAT2AQ92830 837 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 ZBED6CLQ96FA7 236 aaPredicted RBP12.83□□□□□ -0.36
VMP1-201ENST00000262291 C16orf58Q96GQ5 468 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 ZCCHC3Q9NUD5 404 aaKnown RBP12.83□□□□□ -0.36
VMP1-201ENST00000262291 EVA1BQ9NVM1 165 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 USE1Q9NZ43 259 aa12.83□□□□□ -0.36
VMP1-201ENST00000262291 USP36Q9P275 1121 aaKnown RBP12.83□□□□□ -0.36
VMP1-201ENST00000262291 MRPS2Q9Y399 296 aaKnown RBP12.83□□□□□ -0.36
VMP1-201ENST00000262291 PRAMEF27A3QJZ7 478 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 CLPXO76031 633 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 CLK3P49761 638 aaKnown RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 ITGA1P56199 1179 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 ABATP80404 500 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 IFITM2Q01629 132 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FADDQ13158 208 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FBXO43Q4G163 708 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 IFI44LQ53G44 452 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 SAXO2Q658L1 398 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 PRSS41Q7RTY9 318 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 RBM45Q8IUH3 476 aaKnown RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 CHDHQ8NE62 594 aaPredicted RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 OR2L5Q8NG80 312 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 ZNF420Q8TAQ5 688 aaPredicted RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 ASB12Q8WXK4 309 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 COL26A1Q96A83 441 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 NEURL3Q96EH8 262 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 KCNC2Q96PR1 638 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 DOK1Q99704 481 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 RASSF1Q9NS23 344 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 ACTR10Q9NZ32 417 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 C3orf18Q9UK00 162 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 SNX7Q9UNH6 387 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 B4DGG1 531 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 TNFRSF11BO00300 401 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 HMGN4O00479 90 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 MAN2B1O00754 1011 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 SLC28A2O43868 658 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 TNFP01375 233 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 CTSBP07858 339 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 CHRNB1P11230 501 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 TTC23Q5W5X9 447 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 KIAA0895LQ68EN5 471 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 LAIR1Q6GTX8 287 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 SIMC1Q8NDZ2 872 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 OR9Q2Q8NGE9 314 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FLVCR1-AS1Q8TAF5 88 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 SPATA9Q9BWV2 254 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 OR51I1Q9H343 314 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 PALMDQ9NP74 551 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 KRT84Q9NSB2 600 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 CPNE7Q9UBL6 633 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 ANGPT4Q9Y264 503 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 HCRTR1O43613 425 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 MAN1A2O60476 641 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 JRKO75564 520 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 HOXC4P09017 264 aaPredicted RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 SERPINB1P30740 379 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FZD2Q14332 565 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 LASP1Q14847 261 aaKnown RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 SMN1Q16637 294 aaKnown RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 ZNF630Q2M218 657 aaPredicted RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 EXOC3L2Q2M3D2 409 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 DEFB110Q30KQ9 67 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FCRL6Q6DN72 434 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 GPR153Q6NV75 609 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 PIK3C3Q8NEB9 887 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FAM46DQ8NEK8 389 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 TTLQ8NG68 377 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 OR9A2Q8NGT5 310 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 CSF3RQ99062 836 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 PHF7Q9BWX1 381 aaPredicted RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 MROQ9BYG7 248 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 QRSL1Q9H0R6 528 aaKnown RBP12.82□□□□□ -0.36
VMP1-201ENST00000262291 TMEM38AQ9H6F2 299 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 FANCEQ9HB96 536 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
VMP1-201ENST00000262291 TRIM64CA6NLI5 447 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 PRAMEF26H0Y7S4 382 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 M0R129 80 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 PCDH17O14917 1159 aa12.81□□□□□ -0.36
VMP1-201ENST00000262291 RECKO95980 971 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms