RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 NCF1CA8MVU1 366 aaPredicted RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 WWP2O00308 870 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 WISP3O95389 354 aaPredicted RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 S100BP04271 92 aaPredicted RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 SNRPAP09012 282 aaKnown RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 LTA4HP09960 611 aaKnown RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 NCF1P14598 390 aaPredicted RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 CD1DP15813 335 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 PIGAP37287 484 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 IRF9Q00978 393 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 DUSP8Q13202 625 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 NAE1Q13564 534 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 SF3B4Q15427 424 aaKnown RBP eCLIP13.25□□□□□ -0.295e-17■■■■■ 52.1
RABEPK-201ENST00000259460 LGSNQ5TDP6 509 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 ZNF704Q6ZNC4 412 aaPredicted RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 CCDC91Q7Z6B0 441 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 PM20D2Q8IYS1 436 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 GOLM1Q8NBJ4 401 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 KCT2Q8NC54 265 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 ATL1Q8WXF7 558 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 TRMT61AQ96FX7 289 aaKnown RBP13.25□□□□□ -0.29
RABEPK-201ENST00000259460 C1orf159Q96HA4 380 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 PRDM14Q9GZV8 571 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 NMRAL1Q9HBL8 299 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 RNF112Q9ULX5 631 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 LAMP3Q9UQV4 416 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 ACOT9Q9Y305 439 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 OARD1Q9Y530 152 aa13.25□□□□□ -0.29
RABEPK-201ENST00000259460 FREM1Q5H8C1 2179 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 FREM3P0C091 2139 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 IQANK1A0A1B0GTG1 560 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 E7ENX8 843 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ZFAND5O76080 213 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ALDOAP04075 364 aaKnown RBP13.24□□□□□ -0.29
RABEPK-201ENST00000259460 C2P06681 752 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ITGA2P17301 1181 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 IGFBP5P24593 272 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 HSD17B3P37058 310 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 RELAQ04206 551 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 PRDX1Q06830 199 aaKnown RBP13.24□□□□□ -0.29
RABEPK-201ENST00000259460 FAM27E3Q08E93 113 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 PPP1R3AQ16821 1122 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 FAM83EQ2M2I3 478 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 KLC3Q6P597 504 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ZNF550Q7Z398 422 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 GPSM1Q86YR5 675 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 AENQ8WTP8 325 aaKnown RBP13.24□□□□□ -0.29
RABEPK-201ENST00000259460 KCTD4Q8WVF5 259 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 TIMP4Q99727 224 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ALG9Q9H6U8 611 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 ACKR4Q9NPB9 350 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 WWOXQ9NZC7 414 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 CD274Q9NZQ7 290 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 TBK1Q9UHD2 729 aa13.24□□□□□ -0.29
RABEPK-201ENST00000259460 BOKQ9UMX3 212 aaPredicted RBP13.24□□□□□ -0.29
RABEPK-201ENST00000259460 IGKV3D-11A0A0A0MRZ8 115 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 HMX2A2RU54 273 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 SUPT3HB4E1H0 165 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 TCF21O43680 179 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 SUPT3HO75486 399 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 SHBGP04278 402 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 CCND1P24385 295 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 GCAP28676 217 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 CCKARP32238 428 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 SLCO1A2P46721 670 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 DIO3P55073 304 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 MTTPP55157 894 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 KCNJ2P63252 427 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 IFFO1Q0D2I5 559 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 OR4D1Q15615 310 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 CAPN13Q6MZZ7 669 aaPredicted RBP13.23□□□□□ -0.29
RABEPK-201ENST00000259460 ADGRD1Q6QNK2 874 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 PLXDC2Q6UX71 529 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 DNM1P46Q6ZS02 220 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 ZNF611Q8N823 705 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 PYCR2Q96C36 320 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 FBXL8Q96CD0 374 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 MTBPQ96DY7 904 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 ART5Q96L15 291 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 PCBD2Q9H0N5 130 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 PIGMQ9H3S5 423 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 NECTIN3Q9NQS3 549 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 MYOTQ9UBF9 498 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
RABEPK-201ENST00000259460 YLPM1P49750 1951 aaKnown RBP13.23□□□□□ -0.29
RABEPK-201ENST00000259460 LRRC3CA6NJW4 275 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 A8MXE2 369 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 HS3ST1O14792 307 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 CDKN1AP38936 164 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 VLDLRP98155 873 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 CDKL1Q00532 357 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 DLG1Q12959 904 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 TGFBIQ15582 683 aa13.22□□□□□ -0.29
RABEPK-201ENST00000259460 MIDNQ504T8 468 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms