RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 EMC8O43402 210 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 SEC24DO94855 1032 aaPredicted RBP26.05■■□□□ 1.76
CCM2-201ENST00000258781 UBXN7O94888 489 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 ITGAMP11215 1152 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 NR1H2P55055 460 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 GPR19Q15760 415 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 ZNF438Q7Z4V0 828 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 C8orf59Q8N0T1 100 aaPredicted RBP26.05■■□□□ 1.76
CCM2-201ENST00000258781 CSNK1A1LQ8N752 337 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 C3orf14Q9HBI5 128 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 UCKL1Q9NWZ5 548 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 TUBA8Q9NY65 449 aaPredicted RBP26.05■■□□□ 1.76
CCM2-201ENST00000258781 SLC22A7Q9Y694 548 aa26.05■■□□□ 1.76
CCM2-201ENST00000258781 SMIM31A0A1B0GVY4 71 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 VGLL3A8MV65 326 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 SLC16A6O15403 523 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 EIF2S1P05198 315 aaKnown RBP26.04■■□□□ 1.76
CCM2-201ENST00000258781 SP9P0CG40 484 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 OR12D1P0DN82 309 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 RRM2P31350 389 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 CTSKP43235 329 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 DAPP51397 102 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 RPS26P11Q5JNZ5 115 aaPredicted RBP26.04■■□□□ 1.76
CCM2-201ENST00000258781 CYP4Z1Q86W10 505 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 ZC3H10Q96K80 434 aaKnown RBP26.04■■□□□ 1.76
CCM2-201ENST00000258781 ZNF607Q96SK3 696 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.04■■□□□ 1.76
CCM2-201ENST00000258781 TRPC4Q9UBN4 977 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 SPEGQ15772 3267 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 AQP9O43315 295 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 SLC28A2O43868 658 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 DNAJB5O75953 348 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 GNSP15586 552 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 TNFRSF1BP20333 461 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 CD247P20963 164 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 PPP2R1BP30154 601 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 IL18R1Q13478 541 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 ANGPT1Q15389 498 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 FAHD1Q6P587 224 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 TMEM107Q6UX40 140 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 THAP5Q7Z6K1 395 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 C17orf82Q86X59 251 aaPredicted RBP26.04■■□□□ 1.76
CCM2-201ENST00000258781 SMYD1Q8NB12 490 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 PIK3C3Q8NEB9 887 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 PIGKQ92643 395 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 MRPS2Q9Y399 296 aaKnown RBP26.04■■□□□ 1.76
CCM2-201ENST00000258781 ADAMTS9Q9P2N4 1935 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 CCDC88CQ9P219 2028 aa26.04■■□□□ 1.76
CCM2-201ENST00000258781 A0A1W2PS29 197 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 EME2A4GXA9 379 aaPredicted RBP26.03■■□□□ 1.76
CCM2-201ENST00000258781 PRAMEF25A6NGN4 478 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 PIAS2O75928 621 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 MFN2O95140 757 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 ALPPL2P10696 532 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 ST6GAL1P15907 406 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 CDH2P19022 906 aaPredicted RBP26.03■■□□□ 1.76
CCM2-201ENST00000258781 PIGAP37287 484 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 OR1E2P47887 323 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 KCNC4Q03721 635 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 SLC44A2Q8IWA5 706 aaPredicted RBP26.03■■□□□ 1.76
CCM2-201ENST00000258781 LRRC25Q8N386 305 aaPredicted RBP26.03■■□□□ 1.76
CCM2-201ENST00000258781 C19orf47Q8N9M1 422 aaKnown RBP26.03■■□□□ 1.76
CCM2-201ENST00000258781 ZBTB44Q8NCP5 570 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 OR4K14Q8NGD5 310 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 OR9A2Q8NGT5 310 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 RASSF5Q8WWW0 418 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 ELP4Q96EB1 424 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 MAGED4Q96JG8 741 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 CCDC3Q9BQI4 270 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 EXD2Q9NVH0 621 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 LYVE1Q9Y5Y7 322 aa26.03■■□□□ 1.76
CCM2-201ENST00000258781 FAM86C2PA6NEL3 165 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 TRIM64CA6NLI5 447 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 JRKO75564 520 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 CDH3P22223 829 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 XCR1P46094 333 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 CAPZBP47756 277 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 GNA13Q14344 377 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 LAPTM4AQ15012 233 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 SATL1Q86VE3 508 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 OR5D16Q8NGK9 328 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 FSCN3Q9NQT6 498 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 ENPP4Q9Y6X5 453 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 SPACA6W5XKT8 324 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 ARID1BQ8NFD5 2236 aaPredicted RBP26.02■■□□□ 1.76
CCM2-201ENST00000258781 A0A087WXM4 84 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 LOC100130705A0A1B0GUX0 176 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 LMO7DNF2Z398 122 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 TNFRSF11BO00300 401 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 HMGN2P05204 90 aaKnown RBP26.02■■□□□ 1.76
CCM2-201ENST00000258781 PRKAG1P54619 331 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 VSX2P58304 361 aaPredicted RBP26.02■■□□□ 1.76
CCM2-201ENST00000258781 DEFB133Q30KQ1 61 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 ZNF528Q3MIS6 628 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 APOBEC4Q8WW27 367 aaKnown RBP26.02■■□□□ 1.76
CCM2-201ENST00000258781 XAGE5Q8WWM1 108 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 TREX2Q9BQ50 279 aaPredicted RBP26.02■■□□□ 1.76
CCM2-201ENST00000258781 ERVMER34-1Q9H9K5 563 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 BCL2L10Q9HD36 194 aa26.02■■□□□ 1.76
CCM2-201ENST00000258781 KIF17Q9P2E2 1029 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms