RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 FBXW2Q9UKT8 454 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 MMP17Q9ULZ9 603 aa17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 GOLGA4Q13439 2230 aaKnown RBP17.68■□□□□ 0.42
PDLIM4-201ENST00000253754 A0A1W2PR48 441 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 IGFBP1P08833 259 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 AK4P27144 223 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 CERS1P27544 350 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 POU1F1P28069 291 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 LRRC32Q14392 662 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 C18orf63Q68DL7 685 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 ZNF770Q6IQ21 691 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 SLCO6A1Q86UG4 719 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 MIPOL1Q8TD10 442 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC35G5Q96KT7 338 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 ACSS1Q9NUB1 689 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 ZCCHC3Q9NUD5 404 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 TBC1D23Q9NUY8 699 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 TRPC4Q9UBN4 977 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 TBC1D29Q9UFV1 150 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 VPS13AQ96RL7 3174 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 CACNB4O00305 520 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 MAN2B1O00754 1011 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 LIPAP38571 399 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 CTSKP43235 329 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 SNRPNP63162 240 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC9A5Q14940 896 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 TOR1AIP1Q5JTV8 583 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 COLEC12Q5KU26 742 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 TPRG1LQ5T0D9 272 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 USP30Q70CQ3 517 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 RD3Q7Z3Z2 195 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 BTLAQ7Z6A9 289 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 ACOT4Q8N9L9 421 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 PSMA8Q8TAA3 256 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 HMGB4Q8WW32 186 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 PRDM7Q9NQW5 492 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 IMPAD1Q9NX62 359 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 DUSP12Q9UNI6 340 aa17.67■□□□□ 0.42
PDLIM4-201ENST00000253754 CCDC88CQ9P219 2028 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 MYO15AQ9UKN7 3530 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 TRBV23OR9-2A0A075B6M9 112 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 CLCA1A8K7I4 914 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 NME6O75414 186 aaPredicted RBP17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 STSP08842 583 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 CD36P16671 472 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 HIST1H1TP22492 207 aaPredicted RBP17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 CHMP24386 653 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 ACSL1P33121 698 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 GRK3P35626 688 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 ABHD17CQ6PCB6 329 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 C16orf87Q6PH81 154 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 NATD1Q8N6N6 113 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 OR4E2Q8NGC2 313 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 CCL4L1Q8NHW4 92 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 MSANTD3Q96H12 275 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 RAB11FIP5Q9BXF6 653 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 ARMC7Q9H6L4 198 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 MVB12BQ9H7P6 319 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 RMI1Q9H9A7 625 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 ANKRA2Q9H9E1 313 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 TAS2R16Q9NYV7 291 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 SEC14L3Q9UDX4 400 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 FTSJ1Q9UET6 329 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 CA14Q9ULX7 337 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 ASB4Q9Y574 426 aa17.66■□□□□ 0.42
PDLIM4-201ENST00000253754 PRSS38A1L453 326 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 M0R3H8 397 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 PFDN1O60925 122 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 SOX14O95416 240 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 GABRG2P18507 467 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 IDUAP35475 653 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 TPMTP51580 245 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 UBE2UQ5VVX9 321 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 CCDC116Q8IYX3 515 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 CNRIP1Q96F85 164 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 BBS4Q96RK4 519 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 MS4A12Q9NXJ0 267 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 TAS2R7Q9NYW3 318 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 APOBEC3BQ9UH17 382 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 SNRNP200O75643 2136 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 A8MVJ9 347 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 ISM1B1AKI9 464 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 SLC22A1O15245 554 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 AIFM1O95831 613 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 CDK1P06493 297 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 ADRA2AP08913 450 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 DRD2P14416 443 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 ATP5A1P25705 553 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 ELAVL4P26378 380 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 FEN1P39748 380 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 KCNJ5P48544 419 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 TRA2BP62995 288 aaKnown RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 TMEM35AQ53FP2 167 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 TTLQ8NG68 377 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 SUN3Q8TAQ9 357 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 OR1E3Q8WZA6 343 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 ZNF764Q96H86 408 aaPredicted RBP17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 ZNF354BQ96LW1 612 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 PSD2Q9BQI7 771 aa17.65■□□□□ 0.42
PDLIM4-201ENST00000253754 C1QTNF7Q9BXJ2 289 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms