RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TRIM13O60858 407 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 ERAL1O75616 437 aaKnown RBP21.22■□□□□ 0.99
LSM4-201ENST00000252816 NT5EP21589 574 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 PTGER1P34995 402 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 FEN1P39748 380 aaKnown RBP21.22■□□□□ 0.99
LSM4-201ENST00000252816 ALDH9A1P49189 494 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 FUT7Q11130 342 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 KRTCAP3Q53RY4 240 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 GALNT18Q6P9A2 607 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 OPN5Q6U736 354 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 SLC29A4Q7RTT9 530 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 ZFP62Q8NB50 900 aaPredicted RBP21.22■□□□□ 0.99
LSM4-201ENST00000252816 POGLUT1Q8NBL1 392 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 KLHL29Q96CT2 875 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 FAIM2Q9BWQ8 316 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 EBPLQ9BY08 206 aa21.22■□□□□ 0.99
LSM4-201ENST00000252816 IQCGQ9H095 443 aaKnown RBP21.22■□□□□ 0.99
LSM4-201ENST00000252816 DIDO1Q9BTC0 2240 aaKnown RBP21.22■□□□□ 0.99
LSM4-201ENST00000252816 GNG14A0A1W2PPG7 69 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 OR6C76A6NM76 312 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 CYSRT1A8MQ03 144 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 ASNA1O43681 348 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 CRCPO75575 148 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 IL3P08700 152 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 S1PR1P21453 382 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 ALDH3A1P30838 453 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 TIA1P31483 386 aaKnown RBP eCLIP21.21■□□□□ 0.991e-8■■■□□ 17.7
LSM4-201ENST00000252816 DEKP35659 375 aaKnown RBP21.21■□□□□ 0.99
LSM4-201ENST00000252816 MGAT2Q10469 447 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 ZNF791Q3KP31 576 aaPredicted RBP21.21■□□□□ 0.99
LSM4-201ENST00000252816 CLEC6AQ6EIG7 209 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 RTL4Q6ZR62 310 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 TRIM46Q7Z4K8 759 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 FJX1Q86VR8 437 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 ZNF615Q8N8J6 731 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 C16orf78Q8WTQ4 265 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 CNRIP1Q96F85 164 aaPredicted RBP21.21■□□□□ 0.99
LSM4-201ENST00000252816 SGCZQ96LD1 299 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 ZNF681Q96N22 645 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 MECRQ9BV79 373 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 SIRT5Q9NXA8 310 aa21.21■□□□□ 0.99
LSM4-201ENST00000252816 GOLGA6L10A6NI86 522 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 G3V3Y1 287 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 ZNHIT1O43257 154 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 UROSP10746 265 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 GP1BBP13224 206 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 CSNK2A2P19784 350 aaPredicted RBP21.2■□□□□ 0.98
LSM4-201ENST00000252816 SOX18P35713 384 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 SPDYAQ5MJ70 313 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 FAM111BQ6SJ93 734 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 CHERPQ8IWX8 916 aaKnown RBP21.2■□□□□ 0.98
LSM4-201ENST00000252816 ZNF441Q8N8Z8 693 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 GOLM1Q8NBJ4 401 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 C16orf52Q8NHV5 167 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 SLC22A8Q8TCC7 542 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 TCP10LQ8TDR4 215 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 RELTQ969Z4 430 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 UTS2RQ9UKP6 389 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 PSME2Q9UL46 239 aa21.2■□□□□ 0.98
LSM4-201ENST00000252816 TRGV8A0A0C4DH27 118 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 A0A1B0GUH1 482 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 A1L4Q6 167 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 SLC19A2O60779 497 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 ATP1B1P05026 303 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 CCL3P10147 92 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 HSF1Q00613 529 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 RBPJQ06330 500 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 ZNF844Q08AG5 666 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 IMPG1Q17R60 797 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 PRICKLE4Q2TBC4 344 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 SLC15A4Q8N697 577 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 ADCY4Q8NFM4 1077 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 OR2M7Q8NG81 312 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 SPACA9Q96E40 222 aaPredicted RBP21.19■□□□□ 0.98
LSM4-201ENST00000252816 SMC6Q96SB8 1091 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 OR10A5Q9H207 317 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 SH2D2AQ9NP31 389 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 MAT2BQ9NZL9 334 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 ZNF835Q9Y2P0 537 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 CCL27Q9Y4X3 112 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 PTGDR2Q9Y5Y4 395 aa21.19■□□□□ 0.98
LSM4-201ENST00000252816 C2orf92A0A1B0GVN3 265 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 TFECO14948 347 aaPredicted RBP21.18■□□□□ 0.98
LSM4-201ENST00000252816 HS6ST1O60243 411 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 ANXA4P09525 319 aaPredicted RBP21.18■□□□□ 0.98
LSM4-201ENST00000252816 DRD2P14416 443 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 CA7P43166 264 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 MAP4K2Q12851 820 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 DUSP8Q13202 625 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 LTB4RQ15722 352 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.18■□□□□ 0.982e-9■■■□□ 15.1
LSM4-201ENST00000252816 KRT71Q3SY84 523 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 HIST2H2BCQ6DN03 193 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 VWA5B2Q8N398 1253 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 SIMC1Q8NDZ2 872 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 OR7G1Q8NGA0 311 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 ADIPOR1Q96A54 375 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 TRMOQ9BU70 441 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 BRINP2Q9C0B6 783 aa21.18■□□□□ 0.98
LSM4-201ENST00000252816 PLEKHB1Q9UF11 243 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms