RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 A4GNTQ9UNA3 340 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 CARD8Q9Y2G2 431 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 TRANK1O15050 2925 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 IGKV1-8A0A0C4DH67 115 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 C4orf51C9J302 202 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 FRS3O43559 492 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 EFCAB14O75071 495 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 SNRNP200O75643 2136 aaKnown RBP24.17■■□□□ 1.46
RAB40C-201ENST00000248139 MED26O95402 600 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 ILKQ13418 452 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 KCNJ8Q15842 424 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 NDUFAF5Q5TEU4 345 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 LIPKQ5VXJ0 399 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 CCBE1Q6UXH8 406 aaPredicted RBP24.17■■□□□ 1.46
RAB40C-201ENST00000248139 FERD3LQ96RJ6 166 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 TSSK6Q9BXA6 273 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 IMP3Q9NV31 184 aaKnown RBP24.17■■□□□ 1.46
RAB40C-201ENST00000248139 KCNK6Q9Y257 313 aa24.17■■□□□ 1.46
RAB40C-201ENST00000248139 AZGP1P25311 298 aaKnown RBP24.16■■□□□ 1.46
RAB40C-201ENST00000248139 SSR2P43308 183 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 DUSP2Q05923 314 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 FAM78AQ5JUQ0 283 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 NUDT13Q86X67 352 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 OR6T1Q8NGN1 323 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 COX14Q96I36 57 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 KCNE3Q9Y6H6 103 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 HAT1O14929 419 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 PGRMC2O15173 223 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 EPPINO95925 133 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 TP53P04637 393 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-201ENST00000248139 SOX6P35712 828 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 ZNF45Q02386 682 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 TEKQ02763 1124 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 PRKCDQ05655 676 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 SPHARQ15513 63 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 SPANXN2Q5MJ10 180 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 ATAD3BQ5T9A4 648 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 ZER1Q7Z7L7 766 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 Q8N9G6 341 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-201ENST00000248139 C9orf43Q8TAL5 461 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-201ENST00000248139 KLHL6Q8WZ60 621 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 SP140LQ9H930 580 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 SCN3AQ9NY46 2000 aa24.16■■□□□ 1.46
RAB40C-201ENST00000248139 PTNP21246 168 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 SLX4IPQ5VYV7 408 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 METRNLQ641Q3 311 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 ACSM5Q6NUN0 579 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 C19orf48Q6RUI8 117 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 IQCHQ86VS3 1027 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 ZBED6CLQ96FA7 236 aaPredicted RBP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 C12orf66Q96MD2 445 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 POLR2J2Q9GZM3 115 aaKnown RBP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 TMEM245Q9H330 911 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 NEUROD4Q9HD90 331 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 HCN2Q9UL51 889 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 LSM2Q9Y333 95 aaKnown RBP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 PEX16Q9Y5Y5 336 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 COL4A3Q01955 1670 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 ISPDA4D126 451 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 SAGE2PA6NJ88 616 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 OR52A4PA6NMU1 304 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 UGT2B17O75795 530 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 MMP11P24347 488 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 TNFSF8P32971 234 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 BUD31P41223 144 aaPredicted RBP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 NCBP2P52298 156 aaKnown RBP eCLIP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 CSNK1G2P78368 415 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 LASP1Q14847 261 aaKnown RBP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 MLF2Q15773 248 aaPredicted RBP24.15■■□□□ 1.46
RAB40C-201ENST00000248139 CCDC116Q8IYX3 515 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 OR8H2Q8N162 312 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 SUSD6Q92537 303 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 RGMAQ96B86 450 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 C16orf58Q96GQ5 468 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 PPP1R16AQ96I34 528 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 CEP19Q96LK0 163 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 CPNE5Q9HCH3 593 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 SERGEFQ9UGK8 458 aa24.15■■□□□ 1.46
RAB40C-201ENST00000248139 LOC110117498-PIK3R3F6TDL0 507 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 MPZL2O60487 215 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 PAK4O96013 591 aaPredicted RBP24.14■■□□□ 1.46
RAB40C-201ENST00000248139 CDC20Q12834 499 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 TMEM52BQ4KMG9 183 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 TUBA3EQ6PEY2 450 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 OR8K5Q8NH50 307 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 SMG7Q92540 1137 aaKnown RBP24.14■■□□□ 1.46
RAB40C-201ENST00000248139 TMEM80Q96HE8 168 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 SLC35G5Q96KT7 338 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 INSM2Q96T92 566 aaPredicted RBP24.14■■□□□ 1.46
RAB40C-201ENST00000248139 TRMT61BQ9BVS5 477 aaKnown RBP24.14■■□□□ 1.46
RAB40C-201ENST00000248139 PRSS16Q9NQE7 514 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 WDR70Q9NW82 654 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 MOSPD1Q9UJG1 213 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 MGAT4BQ9UQ53 548 aa24.14■■□□□ 1.46
RAB40C-201ENST00000248139 YARS2Q9Y2Z4 477 aaKnown RBP24.14■■□□□ 1.46
RAB40C-201ENST00000248139 KIAA0355O15063 1070 aa24.14■■□□□ 1.45
RAB40C-201ENST00000248139 SLC35G4P0C7Q5 338 aa24.14■■□□□ 1.45
RAB40C-201ENST00000248139 REEP5Q00765 189 aa24.14■■□□□ 1.45
RAB40C-201ENST00000248139 GPR151Q8TDV0 419 aa24.14■■□□□ 1.45
RAB40C-201ENST00000248139 ZG16BQ96DA0 208 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms