RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 LRG1P02750 347 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 SYPP08247 313 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 HYAL2Q12891 473 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 LASP1Q14847 261 aaKnown RBP16■□□□□ 0.15
SGPP1-201ENST00000247225 SLC30A6Q6NXT4 461 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 CBARPQ8N350 705 aaPredicted RBP16■□□□□ 0.15
SGPP1-201ENST00000247225 OR7G1Q8NGA0 311 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 RNFT2Q96EX2 444 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 CDCA4Q9BXL8 241 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 ZCCHC3Q9NUD5 404 aaKnown RBP16■□□□□ 0.15
SGPP1-201ENST00000247225 TAAR2Q9P1P5 351 aa16■□□□□ 0.15
SGPP1-201ENST00000247225 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 ELAVL4P26378 380 aaKnown RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 GNG2P59768 71 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 SUN5Q8TC36 379 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 DCLRE1CQ96SD1 692 aaKnown RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 CHST8Q9H2A9 424 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 RC3H2Q9HBD1 1191 aaKnown RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 DMRT3Q9NQL9 472 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 PTGFRNQ9P2B2 879 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 WNT6Q9Y6F9 365 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 SLC30A4O14863 429 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 C1GALT1C1LP0DN25 315 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 PSMA3P25788 255 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 FLYWCH1Q4VC44 716 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 SMUG1Q53HV7 270 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 VWA5B2Q8N398 1253 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 OR52I1Q8NGK6 324 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 OR5AR1Q8NGP9 310 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 TBC1D20Q96BZ9 403 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 ATG2BQ96BY7 2078 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 A0A0B4J293 547 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 ZNF670-ZNF695F2Z2N8 137 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 H0YIV9 168 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 ERVH48-1M5A8F1 160 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 MRPS14O60783 128 aaKnown RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 OR2B3O76000 313 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 TOXO94900 526 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 PEPDP12955 493 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 NNMTP40261 264 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 RPS7P62081 194 aaKnown RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 KLHL12Q53G59 568 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 MSANTD1Q6ZTZ1 278 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 AMER3Q8N944 861 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 SLC37A3Q8NCC5 494 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 BEST4Q8NFU0 473 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 ING5Q8WYH8 240 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 TM9SF4Q92544 642 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 RNF31Q96EP0 1072 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 SLC6A18Q96N87 628 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 FCRL4Q96PJ5 515 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 SNX18Q96RF0 628 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 GPA33Q99795 319 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 PLA2G12AQ9BZM1 189 aa15.99■□□□□ 0.15
SGPP1-201ENST00000247225 BHLHE41Q9C0J9 482 aaPredicted RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 NXF2Q9GZY0 626 aaKnown RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 CUEDC1Q9NWM3 386 aaPredicted RBP15.99■□□□□ 0.15
SGPP1-201ENST00000247225 ZC3H12DA2A288 527 aaKnown RBP15.98■□□□□ 0.15
SGPP1-201ENST00000247225 MPC1LP0DKB6 136 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 GPR1P46091 355 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 MAP2K3P46734 347 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 CCT3P49368 545 aaKnown RBP15.98■□□□□ 0.15
SGPP1-201ENST00000247225 ZSWIM7Q19AV6 140 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 OR8J1Q8NGP2 316 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 GLYATL1Q969I3 302 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 RAD9AQ99638 391 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 XKR8Q9H6D3 395 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 GSTK1Q9Y2Q3 226 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 PCDHGB2Q9Y5G2 931 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 CACNA1IQ9P0X4 2223 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 PLA2G10O15496 165 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 OR1F1O43749 312 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 IGHA2P01877 340 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 DDX5P17844 614 aaKnown RBP15.98■□□□□ 0.15
SGPP1-201ENST00000247225 MMP11P24347 488 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 TTC23LQ6PF05 361 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 OR2A12Q8NGT7 310 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 SLC5A11Q8WWX8 675 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 POP5Q969H6 163 aaKnown RBP15.98■□□□□ 0.15
SGPP1-201ENST00000247225 DHRS1Q96LJ7 313 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 ZNF717Q9BY31 904 aaPredicted RBP15.98■□□□□ 0.15
SGPP1-201ENST00000247225 HCN2Q9UL51 889 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 CSNK1G3Q9Y6M4 447 aa15.98■□□□□ 0.15
SGPP1-201ENST00000247225 MMP20O60882 483 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 POP7O75817 140 aaKnown RBP15.97■□□□□ 0.15
SGPP1-201ENST00000247225 ARAFP10398 606 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 FABP5Q01469 135 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 TJAP1Q5JTD0 557 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 FAM209AQ5JX71 171 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 LY6G5CQ5SRR4 150 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 PGBD2Q6P3X8 592 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 ZER1Q7Z7L7 766 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 REM2Q8IYK8 340 aaPredicted RBP15.97■□□□□ 0.15
SGPP1-201ENST00000247225 CHCHD4Q8N4Q1 142 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 CREB3L4Q8TEY5 395 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 POF1BQ8WVV4 589 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 TCEAL4Q96EI5 215 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 FAM46AQ96IP4 442 aaKnown RBP15.97■□□□□ 0.15
SGPP1-201ENST00000247225 ZFP3Q96NJ6 502 aa15.97■□□□□ 0.15
SGPP1-201ENST00000247225 KATNB1Q9BVA0 655 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms