RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ACY1Q03154 408 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 CLPPQ16740 277 aaPredicted RBP17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 TCEAL6Q6IPX3 200 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 FKBP9P1Q75LS8 142 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 NUP43Q8NFH3 380 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 OR1L3Q8NH93 324 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 KAT2AQ92830 837 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 TCEAL3Q969E4 200 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 MVB12AQ96EY5 273 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 FGF21Q9NSA1 209 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 C15orf41Q9Y2V0 281 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 DTNAQ9Y4J8 743 aa17.6■□□□□ 0.41
TNFSF9-201ENST00000245817 FGF17O60258 216 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 LDLRP01130 860 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 AQP1P29972 269 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 PTGER1P34995 402 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 TXNL4AP83876 142 aaKnown RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 SLC13A2Q13183 592 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 LTB4RQ15722 352 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 YOD1Q5VVQ6 348 aaPredicted RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 IZUMO2Q6UXV1 221 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 ZNF574Q6ZN55 896 aaPredicted RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 EIF3MQ7L2H7 374 aaKnown RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 ZNF595Q8IYB9 648 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 METTL27Q8N6F8 245 aaPredicted RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 ICA1LQ8NDH6 482 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 FAM110BQ8TC76 370 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 CENPNQ96H22 339 aaPredicted RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 GFM1Q96RP9 751 aaKnown RBP17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 BDH2Q9BUT1 245 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 YIPF2Q9BWQ6 316 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 SLC7A5P2Q9GIP4 190 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 OR51I1Q9H343 314 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 A4GALTQ9NPC4 353 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 ENAMQ9NRM1 1142 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 AGPAT4Q9NRZ5 378 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 PCDHGB2Q9Y5G2 931 aa17.59■□□□□ 0.41
TNFSF9-201ENST00000245817 GPR179Q6PRD1 2367 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 SUV39H1O43463 412 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 OR10H2O60403 315 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 B4GALT2O60909 372 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 SLITRK5O94991 958 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 LDOC1O95751 146 aaPredicted RBP17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 HMGN2P05204 90 aaKnown RBP17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 NT5EP21589 574 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 MAT1AQ00266 395 aaKnown RBP17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 STX4Q12846 297 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 LASP1Q14847 261 aaKnown RBP17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 REEP3Q6NUK4 255 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 CBLL1Q75N03 491 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 SLC44A2Q8IWA5 706 aaPredicted RBP17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 TMEM52Q8NDY8 209 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 OR51Q1Q8NH59 317 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 XAGE5Q8WWM1 108 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 LZICQ8WZA0 190 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 ZNF184Q99676 751 aaPredicted RBP17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 RBCK1Q9BYM8 510 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 PTGFRNQ9P2B2 879 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 P2RX2Q9UBL9 471 aa17.58■□□□□ 0.41
TNFSF9-201ENST00000245817 ADAMTS9Q9P2N4 1935 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ARID1BQ8NFD5 2236 aaPredicted RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 IGHV5-10-1A0A0J9YXX1 117 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 PLOD2O00469 737 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 HMGN4O00479 90 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 CTNSO60931 367 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 DEAF1O75398 565 aaPredicted RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 MT-ND1P03886 318 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ATP1B1P05026 303 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 BCHEP06276 602 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 OR12D1P0DN82 309 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ELOAQ14241 798 aaKnown RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 GNA13Q14344 377 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 TAF11Q15544 211 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ATP6AP1Q15904 470 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 HMBOX1Q6NT76 420 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 TMPRSS9Q7Z410 1059 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ARHGAP22Q7Z5H3 698 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 PATL1Q86TB9 770 aaKnown RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 FAM86B1Q8N7N1 296 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ANKFN1Q8N957 763 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 RHBDD1Q8TEB9 315 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 RAB8BQ92930 207 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 ZNF501Q96CX3 271 aaPredicted RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 TPD52L3Q96J77 140 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 CNDP2Q96KP4 475 aaKnown RBP17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 PRTFDC1Q9NRG1 225 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 PDP2Q9P2J9 529 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 BAG5Q9UL15 447 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 LRRC42Q9Y546 428 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 MAU2Q9Y6X3 613 aa17.58■□□□□ 0.4
TNFSF9-201ENST00000245817 FAM149AA5PLN7 773 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 H3BMH7 237 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 GNGT2O14610 69 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 CLOCKO15516 846 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 FLRT2O43155 660 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 ZNF749O43361 778 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 SLC35E2P0CK97 266 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 NR2F1P10589 423 aa17.57■□□□□ 0.4
TNFSF9-201ENST00000245817 CKMT2P17540 419 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms