RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MAPK8P45983 427 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NPRL3Q12980 569 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 GDPD4Q6W3E5 623 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 NUP54Q7Z3B4 507 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PARP16Q8N5Y8 322 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 DERL2Q9GZP9 239 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 CTDSP2O14595 271 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ADAP00813 363 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 CCR8P51685 355 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 GAB1Q13480 694 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SPHARQ15513 63 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 PRRT3Q5FWE3 981 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 ALKAL2Q6UX46 152 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 MYRFLQ96LU7 910 aa7.2□□□□□ -1.26
RIF1-201ENST00000243326 SNNO75324 88 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 EDN1P05305 212 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 RETP07949 1114 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 GALNT2Q10471 571 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 P4HA3Q7Z4N8 544 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 TMC8Q8IU68 726 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 ZMYND19Q96E35 227 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 LSM5Q9Y4Y9 91 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 PCDHB14Q9Y5E9 798 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 C2orf74A8MZ97 194 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 USP2O75604 605 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 DBPQ10586 325 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 OR52E2Q8NGJ4 325 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 QRSL1Q9H0R6 528 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 PHPT1Q9NRX4 125 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 SLIT3O75094 1523 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 NFAT5O94916 1531 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SMCO3A2RU48 225 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 PIK3CBP42338 1070 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SHQ1Q6PI26 577 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 ZFAND4Q86XD8 727 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 FBXO22Q8NEZ5 403 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CLCC1Q96S66 551 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CARS2Q9HA77 564 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 EVA1BQ9NVM1 165 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 AIG1Q9NVV5 245 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 MOCS1Q9NZB8 636 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CAMTA1Q9Y6Y1 1673 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 RAB19A4D1S5 217 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 AK4P27144 223 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 HSD17B12Q53GQ0 312 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CHDHQ8NE62 594 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 FAM46BQ96A09 425 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 MMP27Q9H306 513 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 MKKSQ9NPJ1 570 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 SEC14L4Q9UDX3 406 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SRRDQ9UH36 339 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 IFT172Q9UG01 1749 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 EPHA1P21709 976 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SLC22A17Q8WUG5 538 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 TGIF2Q9GZN2 237 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 ABCG5Q9H222 651 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SLC32A1Q9H598 525 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 NAALAD2Q9Y3Q0 740 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CRISP3P54108 245 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 DCUN1D4Q92564 292 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 TMEM125Q96AQ2 219 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 INTS6Q9UL03 887 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 STUB1Q9UNE7 303 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SIX6O95475 246 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 FLT3LGP49771 235 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SCAPQ12770 1279 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 FBXO43Q4G163 708 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 C10orf62Q5T681 223 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 ZNF551Q7Z340 670 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 MAVSQ7Z434 540 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SLAIN1Q8ND83 568 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 TCEAL4Q96EI5 215 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 C14orf166Q9Y224 244 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 NEURL4Q96JN8 1562 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CHD5Q8TDI0 1954 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 UNC119BA6NIH7 251 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 WASHC1A8K0Z3 465 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 H7C0S8 307 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 LYRM1O43325 122 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SGCEO43556 437 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 IDSP22304 550 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 PYCR1P32322 319 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CD68P34810 354 aaPredicted RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 STC1P52823 247 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 PTGES3Q15185 160 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 AMZ2Q86W34 360 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CD99L2Q8TCZ2 262 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 NSMAFQ92636 917 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 ARSGQ96EG1 525 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 PARP12Q9H0J9 701 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 TRPS1Q9UHF7 1281 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SPO11Q9Y5K1 396 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 GABRA3P34903 492 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 CRISP1P54107 249 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 RPL26P61254 145 aaKnown RBP7.19□□□□□ -1.26
RIF1-201ENST00000243326 GRM2Q14416 872 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SLAMF9Q96A28 289 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 SLC5A7Q9GZV3 580 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 WDR45Q9Y484 360 aa7.19□□□□□ -1.26
RIF1-201ENST00000243326 ASB3Q9Y575 518 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms