RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 REEP5Q00765 189 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ASPHQ12797 758 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 RIPPLY2Q5TAB7 128 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 PRAMEF20Q5VT98 475 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 HHATQ5VTY9 493 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SULT1C3Q6IMI6 304 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ZYG11AQ6WRX3 759 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SCUBE1Q8IWY4 988 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 GPALPP1Q8IXQ4 340 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 NAXEQ8NCW5 288 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 TNIP2Q8NFZ5 429 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 FBXL8Q96CD0 374 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 JSRP1Q96MG2 331 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SLC17A7Q9P2U7 560 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 NSD1Q96L73 2696 aaPredicted RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SYT5O00445 386 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 LY6G6DO95868 133 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 CPA3P15088 417 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 AHRP35869 848 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ID2Q02363 134 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 FOXO1Q12778 655 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SEM1Q6ZVN7 128 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 TRPV3Q8NET8 790 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 FAM222BQ8WU58 562 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 RNASE6Q93091 150 aaKnown RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 RHBDF1Q96CC6 855 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 CSF3RQ99062 836 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 AIF1LQ9BQI0 150 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SARGQ9BW04 601 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 B4GALT7Q9UBV7 327 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 ATG4BQ9Y4P1 393 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
DDX39A-201ENST00000242776 TNPO3Q9Y5L0 923 aaKnown RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.72□□□□□ -0.37
DDX39A-201ENST00000242776 TUBAL3A6NHL2 446 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 A8MT66 165 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 H3BQF6 201 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 STX16-NPEPL1H3BU86 382 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 CLDN4O14493 209 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 STX16O14662 325 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 SMAD7O15105 426 aaKnown RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 ERI3O43414 337 aaKnown RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 SUSD5O60279 629 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 RFPL3SP0C7P2 107 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 MTHFD2P13995 350 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 HOXC12P31275 282 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 HNRNPH1P31943 449 aaKnown RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 ETV4P43268 484 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 ASCL1P50553 236 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PLA2G16P53816 162 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PRKAA2P54646 552 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 RAB38P57729 211 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 NAA20P61599 178 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 SETDB1Q15047 1291 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PCBP2Q15366 365 aaKnown RBP eCLIP12.71□□□□□ -0.381e-6■■■■■ 27.4
DDX39A-201ENST00000242776 TERF2Q15554 542 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PFKFB4Q16877 469 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 NXPE4Q6UWF7 544 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 THOC6Q86W42 341 aaKnown RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 ULK2Q8IYT8 1036 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 TMEM132CQ8N3T6 1108 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PTGR2Q8N8N7 351 aaPredicted RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 MGARPQ8TDB4 240 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 DOK4Q8TEW6 326 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 UBTD2Q8WUN7 234 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PAIP2Q9BPZ3 127 aaKnown RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 C12orf65Q9H3J6 166 aaKnown RBP12.71□□□□□ -0.38
DDX39A-201ENST00000242776 NEUROD4Q9HD90 331 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 PRM3Q9NNZ6 103 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 SLC22A14Q9Y267 594 aa12.71□□□□□ -0.38
DDX39A-201ENST00000242776 HSPB2A8KAH6 182 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 FAM47E-STBD1D6RA91 191 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 DVL2O14641 736 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 BIRC5O15392 142 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 SBK3P0C264 359 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 NEFHP12036 1026 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 GABRA1P14867 456 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 KCNC1P48547 511 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 SERPINB4P48594 390 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 DCAF7P61962 342 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 KCNJ2P63252 427 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 RNF4P78317 190 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 NKX6-1P78426 367 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 PCLAFQ15004 111 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 ELAVL1Q15717 326 aaKnown RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 HSPB2Q16082 182 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 LIPMQ5VYY2 423 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 LRRC70Q7Z2Q7 622 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 KRTAP1-3Q8IUG1 177 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 CIARTQ8N365 385 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 LIX1Q8N485 282 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 TMEM151AQ8N4L1 468 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 PTPMT1Q8WUK0 201 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 DYDC1Q8WWB3 177 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms