RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 DGAT2Q96PD7 388 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 ZNF300Q96RE9 604 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 BOCQ9BWV1 1114 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 MALT1Q9UDY8 824 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 KIAA0355O15063 1070 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SDC3O75056 442 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SCO1O75880 301 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 APBB3O95704 486 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 MYOGP15173 224 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 ENGP17813 658 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 IGFBP6P24592 240 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 POU4F3Q15319 338 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SGCBQ16585 318 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 TMEM240Q5SV17 173 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 KIAA1161Q6NSJ0 714 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SUSD1Q6UWL2 747 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 PTRH1Q86Y79 214 aaKnown RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 PIH1D2Q8WWB5 315 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SLIRPQ9GZT3 109 aaKnown RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 OR51E2Q9H255 320 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 MTG2Q9H4K7 406 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 GLS2Q9UI32 602 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 DNAJC15Q9Y5T4 150 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 ADAMTSL1Q8N6G6 1762 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 NPIPB15A6NHN6 443 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 ATP5A1P25705 553 aaKnown RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 HOXD9P28356 352 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 PIK3CBP42338 1070 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 RGRP47804 291 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 CDKN1CP49918 316 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 ZNF140P52738 457 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 DCDC1P59894 354 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 RPS13P62277 151 aaKnown RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 ARF5P84085 180 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 CSTF1Q05048 431 aaKnown RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 PROX2Q3B8N5 592 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 ZNF648Q5T619 568 aaPredicted RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 RABEPKQ7Z6M1 372 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SLC30A8Q8IWU4 369 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 PNPLA1Q8N8W4 532 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 ZSCAN1Q8NBB4 408 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 SPPL3Q8TCT6 385 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 YIPF6Q96EC8 236 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 CPEB1Q9BZB8 566 aaKnown RBP10.49□□□□□ -0.73
COPA-201ENST00000241704 OR51B5Q9H339 312 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 ERVMER34-1Q9H9K5 563 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 AIG1Q9NVV5 245 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 FTSJ1Q9UET6 329 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 TMPRSS11EQ9UL52 423 aa10.49□□□□□ -0.73
COPA-201ENST00000241704 LRRC37AA6NMS7 1700 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 C2orf74A8MZ97 194 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 CTDSP2O14595 271 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 XKRYO14609 159 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 MPZL2O60487 215 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 F11P03951 625 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 RPL35P42766 123 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 NCBP2P52298 156 aaKnown RBP eCLIP10.48□□□□□ -0.73
COPA-201ENST00000241704 GPR19Q15760 415 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 CTU2Q2VPK5 515 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 SLC29A4Q7RTT9 530 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 PIANPQ8IYJ0 282 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 OXR1Q8N573 874 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 OR8K5Q8NH50 307 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 MOSPD2Q8NHP6 518 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 FATE1Q969F0 183 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 METTL2AQ96IZ6 378 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 KCNC2Q96PR1 638 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 KCNN2Q9H2S1 579 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 XKR8Q9H6D3 395 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 THUMPD1Q9NXG2 353 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 COMMD3Q9UBI1 195 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 PLAGL1Q9UM63 463 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 IFNGP01579 166 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 ADRB3P13945 408 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 ABHD18Q0P651 414 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 TDGQ13569 410 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 FGFBP1Q14512 234 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 PAGE3Q5JUK9 113 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 DCST1Q5T197 706 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 ZNF730Q6ZMV8 503 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 GJD3Q8N144 294 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 TEX26Q8N6G2 289 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 PLA2G15Q8NCC3 412 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 RHBDD1Q8TEB9 315 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 TSACCQ96A04 125 aaPredicted RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 MCCC2Q9HCC0 563 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 PRDM8Q9NQV8 689 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 FZD4Q9ULV1 537 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 MGAT4AQ9UM21 535 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 PTGDR2Q9Y5Y4 395 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 OAS3Q9Y6K5 1087 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 M0R233 179 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 ATXN1LP0C7T5 689 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 HNRNPA2B1P22626 353 aaKnown RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 PIGAP37287 484 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 CLCN7P51798 805 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 ISL1P61371 349 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 SH3BP2P78314 561 aa10.48□□□□□ -0.73
COPA-201ENST00000241704 TNFAIP8L2Q6P589 184 aaPredicted RBP10.48□□□□□ -0.73
COPA-201ENST00000241704 FAM98AQ8NCA5 519 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms