RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 PRICKLE4Q2TBC4 344 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 SLC9B1Q4ZJI4 515 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 TRMT12Q53H54 448 aaKnown RBP13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 ABHD17BQ5VST6 288 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 HSDL2Q6YN16 418 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 IKBIPQ70UQ0 350 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZADH2Q8N4Q0 377 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 TEX19Q8NA77 164 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 C7orf57Q8NEG2 295 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 PIWIL2Q8TC59 973 aaKnown RBP13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 C7orf26Q96N11 449 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 PELOQ9BRX2 385 aaKnown RBP13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 REEP4Q9H6H4 257 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 SLAMF7Q9NQ25 335 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 ANKRD10Q9NXR5 420 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 MAT2BQ9NZL9 334 aa13.38□□□□□ -0.27
SUPT4H1-201ENST00000225504 SYNDIG1LA6NDD5 238 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 MYO1GB0I1T2 1018 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 KLHL41O60662 606 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF354AO60765 605 aaPredicted RBP13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 NME6O75414 186 aaPredicted RBP13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 CD96P40200 585 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 SLC37A1P57057 533 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 FUT7Q11130 342 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 DUSP8Q13202 625 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 EXOSC7Q15024 291 aaKnown RBP13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 CEBPEQ15744 281 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 MEP1AQ16819 746 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 FAM47EQ6ZV65 393 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 GALNT12Q8IXK2 581 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 KIRREL3Q8IZU9 778 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 ARMC10Q8N2F6 343 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 LRRC25Q8N386 305 aaPredicted RBP13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 KRTCAP2Q8N6L1 136 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF615Q8N8J6 731 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 OR7A2PQ8NGA2 310 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 HAS2Q92819 552 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 KAT2AQ92830 837 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 CIDECQ96AQ7 238 aaPredicted RBP13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 MAGEB18Q96M61 343 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 BBS4Q96RK4 519 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 BRINP2Q9C0B6 783 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 MIEF1Q9NQG6 463 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF639Q9UID6 485 aa13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 EIF3LQ9Y262 564 aaKnown RBP13.37□□□□□ -0.27
SUPT4H1-201ENST00000225504 WWP2O00308 870 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 DPM1O60762 260 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ALDOCP09972 364 aaKnown RBP13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 PRPS2P11908 318 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 PCSK2P16519 638 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 LBPP18428 481 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 EFNA1P20827 205 aaPredicted RBP13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 MAPK1P28482 360 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 MRPS35P82673 323 aaKnown RBP13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 KLRB1Q12918 225 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 PDE7AQ13946 482 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 SMU1Q2TAY7 513 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 HSP90B2PQ58FF3 399 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 SLC6A19Q695T7 634 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 RIMKLAQ8IXN7 391 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 Q8NA96 180 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 CTHRC1Q96CG8 243 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 OR52B2Q96RD2 323 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 GLIPR2Q9H4G4 154 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 EPS8L2Q9H6S3 715 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 MED4Q9NPJ6 270 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ASIC5Q9NY37 505 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 SH3BP4Q9P0V3 963 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 TEKT2Q9UIF3 430 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 USH1CQ9Y6N9 552 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 COL6A6A6NMZ7 2263 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 TRPC5OSA6NMA1 111 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 SLCO1B7G3V0H7 640 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 DYRK3O43781 588 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 TBX19O60806 448 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 VPS4BO75351 444 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 OR2J2O76002 312 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 LAMP1P11279 417 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ASMTP46597 345 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ARG2P78540 354 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 TUBA3CQ13748 450 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF628Q5EBL2 1059 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 TUBA3EQ6PEY2 450 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 RNF111Q6ZNA4 994 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 RGS9BPQ6ZS82 235 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 Q6ZS92 163 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF551Q7Z340 670 aaPredicted RBP13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 ZNF227Q86WZ6 799 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 PPCDCQ96CD2 204 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 THOC1Q96FV9 657 aaKnown RBP13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 AMDHD1Q96NU7 426 aa13.36□□□□□ -0.27
SUPT4H1-201ENST00000225504 SIGLEC12Q96PQ1 595 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms