RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF354AO60765 605 aaPredicted RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 DRD2P14416 443 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 CSNK2A2P19784 350 aaPredicted RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 PRPH2P23942 346 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 TACR1P25103 407 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 GALNSP34059 522 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 TRHRP34981 398 aaPredicted RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 UQCRFS1P47985 274 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 CYB561P49447 251 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 HLCSP50747 726 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 SSR4P51571 173 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 RPL38P63173 70 aaKnown RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 PMP22Q01453 160 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 LTB4RQ15722 352 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 GALNTL6Q49A17 601 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 RFTN2Q52LD8 501 aaPredicted RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 FAM71E1Q6IPT2 247 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 RPUSD3Q6P087 351 aaKnown RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 RNF111Q6ZNA4 994 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 GALNT12Q8IXK2 581 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 TMEM156Q8N614 296 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 ZNF781Q8N8C0 355 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 ADCY4Q8NFM4 1077 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 OR8K3Q8NH51 312 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 FAM76AQ8TAV0 307 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 EGLN2Q96KS0 407 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 ART5Q96L15 291 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 ZNF681Q96N22 645 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 TAAR6Q96RI8 345 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 SORT1Q99523 831 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 BRINP2Q9C0B6 783 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 EXO1Q9UQ84 846 aaKnown RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 YARS2Q9Y2Z4 477 aaKnown RBP11.76□□□□□ -0.53
LSM5-201ENST00000223084 ZNF780BQ9Y6R6 833 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 HECTD1Q9ULT8 2610 aa11.76□□□□□ -0.53
LSM5-201ENST00000223084 TENM4Q6N022 2769 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 ATP6AP2A0A1C7CYW4 349 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 TCP11X1B4DZS4 312 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 PEX11AO75192 247 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 VPS4BO75351 444 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 SLC25A12O75746 678 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 ATP6AP2O75787 350 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 OR6B1O95007 311 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 JUNP05412 331 aaKnown RBP11.75□□□□□ -0.53
LSM5-201ENST00000223084 SP1P08047 785 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 S1PR1P21453 382 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 GNLYP22749 145 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 SOX18P35713 384 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 SOX3P41225 446 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 SLC1A6P48664 564 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 SLC37A1P57057 533 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 MGAT2Q10469 447 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 FUT7Q11130 342 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 STX3Q13277 289 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 HEPACAMQ14CZ8 416 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 MAPKAPK3Q16644 382 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 PRICKLE4Q2TBC4 344 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 XKR7Q5GH72 579 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 AGBL2Q5U5Z8 902 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 SLC25A25Q6KCM7 469 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 IL20RBQ6UXL0 311 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 GALNTL5Q7Z4T8 443 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 TICAM1Q8IUC6 712 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 CCDC116Q8IYX3 515 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 LRRC25Q8N386 305 aaPredicted RBP11.75□□□□□ -0.53
LSM5-201ENST00000223084 SIMC1Q8NDZ2 872 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 OR5L2Q8NGL0 311 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 CLHC1Q8NHS4 586 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.75□□□□□ -0.537e-7■■■□□ 16.2
LSM5-201ENST00000223084 ASB15Q8WXK1 588 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 GFM2Q969S9 779 aaKnown RBP11.75□□□□□ -0.53
LSM5-201ENST00000223084 SCMH1Q96GD3 660 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 PPP1R36Q96LQ0 422 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 C5orf34Q96MH7 638 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 GAL3ST4Q96RP7 486 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 RASL10BQ96S79 203 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
LSM5-201ENST00000223084 ANKRA2Q9H9E1 313 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 MYNNQ9NPC7 610 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 ARGLU1Q9NWB6 273 aaPredicted RBP11.75□□□□□ -0.53
LSM5-201ENST00000223084 MAT2BQ9NZL9 334 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 BAIAP2L1Q9UHR4 511 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 VPS4AQ9UN37 437 aa11.75□□□□□ -0.53
LSM5-201ENST00000223084 A8MVJ9 347 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 AKAP10O43572 662 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 LRATO95237 230 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 RASAL1O95294 804 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 ATP1B1P05026 303 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 CD46P15529 392 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 PCSK2P16519 638 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 SDC1P18827 310 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 DDCP20711 480 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 GSTM5P46439 218 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 MRPS35P82673 323 aaKnown RBP11.74□□□□□ -0.53
LSM5-201ENST00000223084 KCNC4Q03721 635 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 BST1Q10588 318 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 DUSP8Q13202 625 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 MRPL49Q13405 166 aaKnown RBP11.74□□□□□ -0.53
LSM5-201ENST00000223084 EXOSC7Q15024 291 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms