RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 IL1RNP18510 177 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 MAP2K4P45985 399 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 RPL6Q02878 288 aaKnown RBP10.98□□□□□ -0.65
NOD1-201ENST00000222823 HNRNPA0Q13151 305 aaKnown RBP10.98□□□□□ -0.65
NOD1-201ENST00000222823 PRAMEF17Q5VTA0 474 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 OR4C11Q6IEV9 310 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 MSANTD1Q6ZTZ1 278 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 RASGEF1AQ8N9B8 481 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 NEIL3Q8TAT5 605 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 THRSPQ92748 146 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PMM1Q92871 262 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 S100A16Q96FQ6 103 aaKnown RBP10.98□□□□□ -0.65
NOD1-201ENST00000222823 TMEM19Q96HH6 336 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 TGM7Q96PF1 710 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PIAS3Q9Y6X2 628 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 MAU2Q9Y6X3 613 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 ZNF878C9JN71 531 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PPM1BO75688 479 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 APBB3O95704 486 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 HEXBP07686 556 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 FOXA1P55317 472 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 TAS2R38P59533 333 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 TUBB3Q13509 450 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 SCGB2B2Q4G0G5 96 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PAGE3Q5JUK9 113 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 TMEM225Q6GV28 225 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 USP53Q70EK8 1073 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 MDGA1Q8NFP4 955 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 C16orf78Q8WTQ4 265 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 ENAMQ9NRM1 1142 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 C11orf98E9PRG8 122 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 SOCS2O14508 198 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 MUSKO15146 869 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 TIMP1P01033 207 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 BMP2P12643 396 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 GABRB3P28472 473 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PYCR1P32322 319 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 ADRA1AP35348 466 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 CD83Q01151 205 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 ZNF33BQ06732 778 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 RPA4Q13156 261 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PMS2P3Q13401 168 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 SEC23BQ15437 767 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 ABCA11PQ4W5N1 156 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 GRHL2Q6ISB3 625 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 STX12Q86Y82 276 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.98□□□□□ -0.65
NOD1-201ENST00000222823 MAL2Q969L2 176 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 ECHDC3Q96DC8 303 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 LRR1Q96L50 414 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 PELOQ9BRX2 385 aaKnown RBP10.98□□□□□ -0.65
NOD1-201ENST00000222823 TMEM184CQ9NVA4 438 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 HCFC1R1Q9NWW0 138 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 MEMO1Q9Y316 297 aa10.98□□□□□ -0.65
NOD1-201ENST00000222823 A0A1B0GVI7 797 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 NPC1O15118 1278 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 KCNJ13O60928 360 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 OR2B3O76000 313 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 SCGNO76038 276 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 SLITRK5O94991 958 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 CA3P07451 260 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 VAMP1P23763 118 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 HK3P52790 923 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 AP2S1P53680 142 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 CLCA4Q14CN2 919 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 OTUD1Q5VV17 481 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 ULK3Q6PHR2 472 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 KCTD18Q6PI47 426 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 FIGNL1Q6PIW4 674 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 FIGLAQ6QHK4 219 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 ZNF367Q7RTV3 350 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 C7orf57Q8NEG2 295 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 FOXJ1Q92949 421 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 NECTIN4Q96NY8 510 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 KLF16Q9BXK1 252 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 LOC285095A0A1B0GVY8 99 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 ARHGEF15O94989 841 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 AK1P00568 194 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 PRH1P02810 166 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 CSF2P04141 144 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 FCER2P06734 321 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 RPS17P08708 135 aaKnown RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 VEGFBP49765 207 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 EIF5AP63241 154 aaKnown RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 RPL13AP3Q6NVV1 102 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 OR4K5Q8NGD3 323 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 ARRDC2Q8TBH0 407 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 PNPLA2Q96AD5 504 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 DEFB126Q9BYW3 111 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 ZNF304Q9HCX3 659 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 ANKMY1Q9P2S6 941 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 HCN2Q9UL51 889 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 SCO2O43819 266 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 S100A6P06703 90 aa10.97□□□□□ -0.65
NOD1-201ENST00000222823 ENDOUP21128 410 aaKnown RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 PRDX3P30048 256 aaKnown RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 RBM34P42696 430 aaKnown RBP10.97□□□□□ -0.65
NOD1-201ENST00000222823 ZNF45Q02386 682 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms