RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ERVK-8P63133 956 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 PHEXP78562 749 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 BIKQ13323 160 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 GTF2H2Q13888 395 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ACAP2Q15057 778 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 CPSF6Q16630 551 aaKnown RBP eCLIP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 HYAL4Q2M3T9 481 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 PRAMEF20Q5VT98 475 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 SLC22A10Q63ZE4 541 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 GTF2H2CQ6P1K8 395 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ADGRD1Q6QNK2 874 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 LYPD8Q6UX82 237 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ACAD11Q709F0 780 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 TAOK1Q7L7X3 1001 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 GOLGA7Q7Z5G4 137 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 EXOC3L1Q86VI1 746 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 OR10Q1Q8NGQ4 319 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 UCN3Q969E3 161 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 FBXL20Q96IG2 436 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 GAL3ST4Q96RP7 486 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 CNPPD1Q9BV87 410 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ERVK-6Q9BXR3 956 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 SH2D2AQ9NP31 389 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 KCNJ16Q9NPI9 418 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 CPSF2Q9P2I0 782 aaKnown RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ERVK-19Q9WJR5 959 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ASB4Q9Y574 426 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 FAM215AQ9Y5M1 114 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 ACTL7BQ9Y614 415 aa13.83□□□□□ -0.2
UPK3A-201ENST00000216211 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.83□□□□□ -0.2
UPK3A-201ENST00000216211 F8P00451 2351 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 A0A096LPK6 155 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 A0A0A6YYD5 115 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 POC1B-GALNT4F8VUJ3 575 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 H0YIV9 168 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 AQP7O14520 342 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 TMPRSS11DO60235 418 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 KLK8O60259 260 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 LRATO95237 230 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 SIX3O95343 332 aaPredicted RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 MSX1P28360 303 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 PIK3CGP48736 1102 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 NEK2P51955 445 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 ZNF267Q14586 743 aaPredicted RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 SLC10A1Q14973 349 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 PCBP2Q15366 365 aaKnown RBP eCLIP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 RTL6Q6ICC9 239 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 MRM1Q6IN84 353 aaKnown RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 CYP20A1Q6UW02 462 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 CDH24Q86UP0 819 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 ST13P4Q8IZP2 240 aaPredicted RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 SLC15A4Q8N697 577 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 WDR20Q8TBZ3 569 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 PAQR8Q8TEZ7 354 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 REPS1Q96D71 796 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 SPACA9Q96E40 222 aaPredicted RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 GPR78Q96P69 363 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 TTYH2Q9BSA4 534 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 EXO5Q9H790 373 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 IPPKQ9H8X2 491 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 LYARQ9NX58 379 aaKnown RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 PSMC3IPQ9P2W1 217 aaPredicted RBP13.82□□□□□ -0.2
UPK3A-201ENST00000216211 ACAD8Q9UKU7 415 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 RNF11Q9Y3C5 154 aa13.82□□□□□ -0.2
UPK3A-201ENST00000216211 HIVEP1P15822 2718 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 IQANK1A0A1B0GTG1 560 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 A0A1W2PR48 441 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SUSD5O60279 629 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 OR10H2O60403 315 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 UGDHO60701 494 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 GPR75O95800 540 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 GBAP04062 536 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 RFPL3SP0C7P2 107 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 FAM58BPP0C7Q3 252 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 GLI4P10075 376 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 NR2F6P10588 404 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 ENDOUP21128 410 aaKnown RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 TYK2P29597 1187 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SERPINB8P50452 374 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 ARFIP1P53367 373 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SLC37A1P57057 533 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 KCNJ2P63252 427 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 CUL3Q13618 768 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SPRED3Q2MJR0 410 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 TECRLQ5HYJ1 363 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 KLC3Q6P597 504 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 B3GNT6Q6ZMB0 384 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 RNF111Q6ZNA4 994 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SLC29A4Q7RTT9 530 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 CCDC91Q7Z6B0 441 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 DMRTC2Q8IXT2 367 aaPredicted RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 PLD6Q8N2A8 252 aaKnown RBP13.81□□□□□ -0.2
UPK3A-201ENST00000216211 FBXW8Q8N3Y1 598 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 FAM13CQ8NE31 585 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 OR10G3Q8NGC4 313 aa13.81□□□□□ -0.2
UPK3A-201ENST00000216211 SARAFQ96BY9 339 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms