RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Myh8P13542 1937 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fam84bD3YXJ5 310 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r49D3Z6L3 852 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r32K7N686 852 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 DdostO54734 441 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Il11ra2P70225 432 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Muc19Q6JHY2 733 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Colec10Q8CF98 277 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zdhhc1Q8R0N9 484 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1278Q8VF39 313 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr617Q8VGA1 318 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 L2hgdhQ91YP0 464 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adgrf4Q9D2L6 698 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr701Q9D3U9 316 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acox3Q9EPL9 700 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Stk25Q9Z2W1 426 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Spag17Q5S003 2320 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r75G5E8Z7 853 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zfp994J3QM38 661 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mtnd5P03921 607 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Etv1P41164 477 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MthfsdQ3URQ7 372 aaKnown RBP9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nox3Q672J9 568 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 IgflQ6B9Z0 140 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fndc9Q8BJN4 226 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cops8Q8VBV7 209 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 VapaQ9WV55 249 aaKnown RBP9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r88L7N1W8 857 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dhcr7O88455 471 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 SpnP15702 395 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ThpoP40226 356 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adamts10P58459 1104 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 CdonQ32MD9 1250 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 MertkQ60805 994 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Apex2Q68G58 516 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Chst9Q76EC5 413 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1085Q7TR64 313 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acat3Q80X81 397 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slfn5Q8CBA2 884 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dnajc27Q8CFP6 273 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rab3bQ9CZT8 219 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mrpl39Q9JKF7 336 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Prl4a1O35256 227 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc28a2O88627 660 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gabra3P26049 492 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 B3gntl1Q3U129 357 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 LppQ8BFW7 613 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn1r84Q8R284 318 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc41a3Q921R8 488 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Arfgap1Q9EPJ9 414 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tcf7l1Q9Z1J1 584 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rgs6Q9Z2H2 472 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm10717D3Z1I8 228 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 PtprhE9Q0N2 971 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 A430033K04RikE9Q8G5 680 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm14139F6ZS36 494 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 BdnfP21237 249 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Clk1P22518 483 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cd28P31041 218 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Resp18P47939 175 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nudt1P53368 156 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 C130050O18RikQ497Y9 356 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gm12258Q5NC63 627 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cdk3Q80YP0 303 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ccdc142Q8CAI1 738 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mchr1Q8JZL2 353 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr134Q8VG95 312 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem8aQ9ESN3 769 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pik3c2aQ61194 1686 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Crisp4E9PVG4 293 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn2r105E9Q3A5 860 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 AmbnO55189 407 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Syn1O88935 706 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cox4i1P19783 169 aaKnown RBP9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Stfa2P35174 103 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Foxk1P42128 719 aaKnown RBP9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dsc3P55850 896 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rps13P62301 151 aaKnown RBP9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tbx4P70325 552 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Abcg1Q64343 666 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cntn4Q69Z26 1026 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Inpp5kQ8C5L6 468 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Il17rdQ8JZL1 738 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Traf3ip2Q8N7N6 555 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Kiaa0513Q8R0A7 407 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Oard1Q8R5F3 152 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cyp2u1Q9CX98 530 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cml5Q9QXS8 227 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Hey1Q9WV93 299 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Klrc1Q9Z202 244 aa9.74□□□□□ -0.85
Ubr1-201ENSMUST00000028728 IghdA0A0A6YW14 291 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tlx3O55144 291 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Il6raP22272 460 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 PitpnbP53811 271 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rbm11Q80YT9 238 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fastkd3Q8BSN9 661 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr575Q8VH16 318 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Snx11Q91WL6 271 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Galnt11Q921L8 608 aa9.73□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rtn4ip1Q924D0 396 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms