RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CYP19A1P11511 503 aaPredicted RBP22.02■■□□□ 1.12
PHGDH-232ENST00000641947 GCC1Q96CN9 775 aa22.02■■□□□ 1.12
PHGDH-232ENST00000641947 DCTPP1Q9H773 170 aa22.02■■□□□ 1.12
PHGDH-232ENST00000641947 MYD88Q99836 296 aa22.02■■□□□ 1.11
PHGDH-232ENST00000641947 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.11
PHGDH-232ENST00000641947 PNMA6EA0A0J9YXQ4 647 aa22.01■■□□□ 1.11
PHGDH-232ENST00000641947 PLBD2Q8NHP8 589 aa22.01■■□□□ 1.11
PHGDH-232ENST00000641947 NEURL1BA8MQ27 555 aa22■■□□□ 1.11
PHGDH-232ENST00000641947 PALLDQ8WX93 1383 aa22■■□□□ 1.11
PHGDH-232ENST00000641947 QTRT2Q9H974 415 aaKnown RBP21.99■■□□□ 1.11
PHGDH-232ENST00000641947 ANKRD36CQ5JPF3 1778 aa21.99■■□□□ 1.11
PHGDH-232ENST00000641947 STARD3NLO95772 234 aa21.99■■□□□ 1.11
PHGDH-232ENST00000641947 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
PHGDH-232ENST00000641947 IBTKQ9P2D0 1353 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-232ENST00000641947 UTYO14607 1347 aa21.98■■□□□ 1.11
PHGDH-232ENST00000641947 NUP98P52948 1817 aa21.98■■□□□ 1.11
PHGDH-232ENST00000641947 ATP8B2P98198 1209 aa21.98■■□□□ 1.11
PHGDH-232ENST00000641947 CHD1LQ86WJ1 897 aa21.98■■□□□ 1.11
PHGDH-232ENST00000641947 SEPT12Q8IYM1 358 aa21.98■■□□□ 1.11
PHGDH-232ENST00000641947 LOC102724428A0A0B4J2F2 783 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 SIK1P57059 783 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 ITPK1Q13572 414 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 ANKRD45Q5TZF3 282 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 ZBTB1Q9Y2K1 713 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 GRM8O00222 908 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 NEXNQ0ZGT2 675 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 ZBTB3Q9H5J0 574 aa21.97■■□□□ 1.11
PHGDH-232ENST00000641947 C9orf78Q9NZ63 289 aaPredicted RBP21.97■■□□□ 1.11
PHGDH-232ENST00000641947 LY75O60449 1722 aa21.96■■□□□ 1.11
PHGDH-232ENST00000641947 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
PHGDH-232ENST00000641947 GCKRQ14397 625 aa21.96■■□□□ 1.11
PHGDH-232ENST00000641947 KAZALD1Q96I82 304 aa21.96■■□□□ 1.11
PHGDH-232ENST00000641947 RBM19Q9Y4C8 960 aaKnown RBP21.96■■□□□ 1.11
PHGDH-232ENST00000641947 ZNF330Q9Y3S2 320 aaPredicted RBP21.95■■□□□ 1.1
PHGDH-232ENST00000641947 HMMRO75330 724 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 SSH3Q8TE77 659 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 BACH2Q9BYV9 841 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
PHGDH-232ENST00000641947 C8orf34Q49A92 452 aa21.93■■□□□ 1.1
PHGDH-232ENST00000641947 POLA2Q14181 598 aa21.92■■□□□ 1.1
PHGDH-232ENST00000641947 INTS5Q6P9B9 1019 aaKnown RBP21.92■■□□□ 1.1
PHGDH-232ENST00000641947 EXOC6BQ9Y2D4 811 aa21.92■■□□□ 1.1
PHGDH-232ENST00000641947 JARID2Q92833 1246 aaPredicted RBP21.92■■□□□ 1.1
PHGDH-232ENST00000641947 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
PHGDH-232ENST00000641947 APBB1O00213 710 aa21.91■■□□□ 1.1
PHGDH-232ENST00000641947 SMARCA5O60264 1052 aaPredicted RBP21.91■■□□□ 1.1
PHGDH-232ENST00000641947 CRKLP46109 303 aaKnown RBP21.9■■□□□ 1.1
PHGDH-232ENST00000641947 CASP7P55210 303 aa21.9■■□□□ 1.1
PHGDH-232ENST00000641947 MTX1Q13505 466 aa21.9■■□□□ 1.1
PHGDH-232ENST00000641947 SRGAP3O43295 1099 aa21.89■■□□□ 1.1
PHGDH-232ENST00000641947 KCNQ4P56696 695 aa21.89■■□□□ 1.1
PHGDH-232ENST00000641947 EPHA10Q5JZY3 1008 aa21.89■■□□□ 1.1
PHGDH-232ENST00000641947 BICC1Q9H694 974 aaKnown RBP21.89■■□□□ 1.1
PHGDH-232ENST00000641947 MAP3K15Q6ZN16 1313 aa21.89■■□□□ 1.09
PHGDH-232ENST00000641947 BCORQ6W2J9 1755 aa21.89■■□□□ 1.09
PHGDH-232ENST00000641947 IL6STP40189 918 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-232ENST00000641947 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-232ENST00000641947 CCDC87Q9NVE4 849 aa21.89■■□□□ 1.09
PHGDH-232ENST00000641947 HLFQ16534 295 aa21.88■■□□□ 1.09
PHGDH-232ENST00000641947 FAM161AQ3B820 660 aa21.88■■□□□ 1.09
PHGDH-232ENST00000641947 KIF6Q6ZMV9 814 aa21.88■■□□□ 1.09
PHGDH-232ENST00000641947 ISCA1Q9BUE6 129 aa21.88■■□□□ 1.09
PHGDH-232ENST00000641947 TUBGCP6Q96RT7 1819 aa21.87■■□□□ 1.09
PHGDH-232ENST00000641947 EIF5P55010 431 aaKnown RBP21.87■■□□□ 1.09
PHGDH-232ENST00000641947 UBE3BQ7Z3V4 1068 aa21.87■■□□□ 1.09
PHGDH-232ENST00000641947 LINC00116Q8NCU8 138 aa21.87■■□□□ 1.09
PHGDH-232ENST00000641947 OTUD7AQ8TE49 926 aaPredicted RBP21.87■■□□□ 1.09
PHGDH-232ENST00000641947 A0A087WZG4 1122 aa21.87■■□□□ 1.09
PHGDH-232ENST00000641947 TCIRG1Q13488 830 aa21.86■■□□□ 1.09
PHGDH-232ENST00000641947 CWC25Q9NXE8 425 aaPredicted RBP21.86■■□□□ 1.09
PHGDH-232ENST00000641947 COL15A1P39059 1388 aa21.85■■□□□ 1.09
PHGDH-232ENST00000641947 H7C1W4 665 aa21.84■■□□□ 1.09
PHGDH-232ENST00000641947 GIGYF2Q6Y7W6 1299 aaKnown RBP21.84■■□□□ 1.09
PHGDH-232ENST00000641947 ARXQ96QS3 562 aa21.84■■□□□ 1.09
PHGDH-232ENST00000641947 BCL11AQ9H165 835 aa21.84■■□□□ 1.09
PHGDH-232ENST00000641947 TBC1D2BQ9UPU7 963 aa21.84■■□□□ 1.09
PHGDH-232ENST00000641947 PLEKHM2Q8IWE5 1019 aa21.84■■□□□ 1.09
PHGDH-232ENST00000641947 CCDC191Q8NCU4 936 aa21.84■■□□□ 1.09
PHGDH-232ENST00000641947 DZIP3Q86Y13 1208 aaKnown RBP21.83■■□□□ 1.09
PHGDH-232ENST00000641947 MYH3P11055 1940 aa21.82■■□□□ 1.08
PHGDH-232ENST00000641947 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-232ENST00000641947 ZNF772Q68DY9 489 aaPredicted RBP21.82■■□□□ 1.08
PHGDH-232ENST00000641947 PA2G4Q9UQ80 394 aaKnown RBP21.82■■□□□ 1.08
PHGDH-232ENST00000641947 HDAC5Q9UQL6 1122 aa21.82■■□□□ 1.08
PHGDH-232ENST00000641947 SURF6O75683 361 aaKnown RBP21.82■■□□□ 1.08
PHGDH-232ENST00000641947 RBM6P78332 1123 aaKnown RBP21.82■■□□□ 1.08
PHGDH-232ENST00000641947 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
PHGDH-232ENST00000641947 SCN7AQ01118 1682 aa21.81■■□□□ 1.08
PHGDH-232ENST00000641947 TRIM28Q13263 835 aaKnown RBP21.81■■□□□ 1.08
PHGDH-232ENST00000641947 RABL6Q3YEC7 729 aaPredicted RBP21.81■■□□□ 1.08
PHGDH-232ENST00000641947 LRRCC1Q9C099 1032 aa21.81■■□□□ 1.08
PHGDH-232ENST00000641947 NOP58Q9Y2X3 529 aaKnown RBP21.81■■□□□ 1.08
PHGDH-232ENST00000641947 C4BP0C0L5 1744 aa21.81■■□□□ 1.08
PHGDH-232ENST00000641947 SALL3Q9BXA9 1300 aa21.8■■□□□ 1.08
PHGDH-232ENST00000641947 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
PHGDH-232ENST00000641947 ERVV-1B6SEH8 477 aa21.79■■□□□ 1.08
PHGDH-232ENST00000641947 GPTP24298 496 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms