RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 POLA2Q14181 598 aa12.04□□□□□ -0.48
PHGDH-215ENST00000641371 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
PHGDH-215ENST00000641371 DDRGK1Q96HY6 314 aa12.04□□□□□ -0.48
PHGDH-215ENST00000641371 LRRCC1Q9C099 1032 aa12.04□□□□□ -0.48
PHGDH-215ENST00000641371 TRPC5Q9UL62 973 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-215ENST00000641371 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
PHGDH-215ENST00000641371 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
PHGDH-215ENST00000641371 GCKRQ14397 625 aa12.03□□□□□ -0.48
PHGDH-215ENST00000641371 CCDC191Q8NCU4 936 aa12.03□□□□□ -0.48
PHGDH-215ENST00000641371 ASAP1Q9ULH1 1129 aa12.03□□□□□ -0.48
PHGDH-215ENST00000641371 AOX1Q06278 1338 aa12.03□□□□□ -0.48
PHGDH-215ENST00000641371 RGL2O15211 777 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 SRGAP3O43295 1099 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-215ENST00000641371 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-215ENST00000641371 SYTL4Q96C24 671 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-215ENST00000641371 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 MYD88Q99836 296 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
PHGDH-215ENST00000641371 OSBPL3Q9H4L5 887 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
PHGDH-215ENST00000641371 TJP1Q07157 1748 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 ATRNO75882 1429 aa12.02□□□□□ -0.49
PHGDH-215ENST00000641371 RREB1Q92766 1687 aa12.01□□□□□ -0.49
PHGDH-215ENST00000641371 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
PHGDH-215ENST00000641371 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
PHGDH-215ENST00000641371 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-215ENST00000641371 HSPA1LP34931 641 aa12.01□□□□□ -0.49
PHGDH-215ENST00000641371 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
PHGDH-215ENST00000641371 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
PHGDH-215ENST00000641371 NBPF10Q6P3W6 841 aaKnown RBP12.01□□□□□ -0.49
PHGDH-215ENST00000641371 NBPF15Q8N660 670 aa12.01□□□□□ -0.49
PHGDH-215ENST00000641371 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-215ENST00000641371 NHSQ6T4R5 1651 aa12□□□□□ -0.49
PHGDH-215ENST00000641371 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
PHGDH-215ENST00000641371 ONECUT3O60422 494 aaPredicted RBP12□□□□□ -0.49
PHGDH-215ENST00000641371 A1BGP04217 495 aa12□□□□□ -0.49
PHGDH-215ENST00000641371 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
PHGDH-215ENST00000641371 CASC1Q6TDU7 716 aa12□□□□□ -0.49
PHGDH-215ENST00000641371 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
PHGDH-215ENST00000641371 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
PHGDH-215ENST00000641371 ANKRD36CQ5JPF3 1778 aa12□□□□□ -0.49
PHGDH-215ENST00000641371 PNMA6EA0A0J9YXQ4 647 aa11.99□□□□□ -0.49
PHGDH-215ENST00000641371 HSP90B1P14625 803 aaKnown RBP11.99□□□□□ -0.49
PHGDH-215ENST00000641371 CWF19L2Q2TBE0 894 aaKnown RBP11.99□□□□□ -0.49
PHGDH-215ENST00000641371 PLEKHM2Q8IWE5 1019 aa11.99□□□□□ -0.49
PHGDH-215ENST00000641371 MAP3K15Q6ZN16 1313 aa11.99□□□□□ -0.49
PHGDH-215ENST00000641371 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 AFF2P51816 1311 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 A0A087WZG4 1122 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 LOC102724428A0A0B4J2F2 783 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 SURF6O75683 361 aaKnown RBP11.98□□□□□ -0.49
PHGDH-215ENST00000641371 SIK1P57059 783 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 TCIRG1Q13488 830 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-215ENST00000641371 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 ISCA1Q9BUE6 129 aa11.98□□□□□ -0.49
PHGDH-215ENST00000641371 A0A0G2JS52 829 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 H7C1W4 665 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 CDC45O75419 566 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 MYT1Q01538 1121 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 G3BP1Q13283 466 aaKnown RBP eCLIP11.97□□□□□ -0.491e-7■■■■□ 21.7
PHGDH-215ENST00000641371 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-215ENST00000641371 GIGYF2Q6Y7W6 1299 aaKnown RBP11.97□□□□□ -0.49
PHGDH-215ENST00000641371 CLASRPQ8N2M8 674 aaKnown RBP11.97□□□□□ -0.49
PHGDH-215ENST00000641371 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 STAP2Q9UGK3 403 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 EXOC6BQ9Y2D4 811 aa11.97□□□□□ -0.49
PHGDH-215ENST00000641371 COL5A3P25940 1745 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-215ENST00000641371 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.49
PHGDH-215ENST00000641371 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
PHGDH-215ENST00000641371 TTLL7Q6ZT98 887 aa11.96□□□□□ -0.49
PHGDH-215ENST00000641371 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
PHGDH-215ENST00000641371 AK7Q96M32 723 aa11.96□□□□□ -0.49
PHGDH-215ENST00000641371 BICC1Q9H694 974 aaKnown RBP11.96□□□□□ -0.49
PHGDH-215ENST00000641371 COPRSQ9NQ92 184 aa11.96□□□□□ -0.49
PHGDH-215ENST00000641371 CDHR2Q9BYE9 1310 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
PHGDH-215ENST00000641371 ERC2O15083 957 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
PHGDH-215ENST00000641371 MX1P20591 662 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 PDE1AP54750 535 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
PHGDH-215ENST00000641371 PLA2G12BQ9BX93 195 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 NUP98P52948 1817 aa11.95□□□□□ -0.5
PHGDH-215ENST00000641371 SALL3Q9BXA9 1300 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
PHGDH-215ENST00000641371 CASP7P55210 303 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
PHGDH-215ENST00000641371 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
PHGDH-215ENST00000641371 UBE3BQ7Z3V4 1068 aa11.94□□□□□ -0.5
PHGDH-215ENST00000641371 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms