RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 STARD3NLO95772 234 aa24.13■■□□□ 1.45
VPS72-207ENST00000640458 PASKQ96RG2 1323 aa24.12■■□□□ 1.45
VPS72-207ENST00000640458 IQCA1LA6NCM1 817 aa24.12■■□□□ 1.45
VPS72-207ENST00000640458 LDHDQ86WU2 507 aa24.12■■□□□ 1.45
VPS72-207ENST00000640458 NPHP1O15259 732 aa24.11■■□□□ 1.45
VPS72-207ENST00000640458 LBX1P52954 281 aa24.11■■□□□ 1.45
VPS72-207ENST00000640458 CNKSR1Q969H4 720 aa24.11■■□□□ 1.45
VPS72-207ENST00000640458 TBC1D2BQ9UPU7 963 aa24.11■■□□□ 1.45
VPS72-207ENST00000640458 COL11A2P13942 1736 aaPredicted RBP24.1■■□□□ 1.45
VPS72-207ENST00000640458 TMEM88BA6NKF7 163 aa24.1■■□□□ 1.45
VPS72-207ENST00000640458 TTC5Q8N0Z6 440 aa24.1■■□□□ 1.45
VPS72-207ENST00000640458 PLEKHF1Q96S99 279 aa24.1■■□□□ 1.45
VPS72-207ENST00000640458 PNNQ9H307 717 aaKnown RBP24.1■■□□□ 1.45
VPS72-207ENST00000640458 SLC34A2O95436 690 aa24.09■■□□□ 1.45
VPS72-207ENST00000640458 NEFMP07197 916 aa24.09■■□□□ 1.45
VPS72-207ENST00000640458 EAPPQ56P03 285 aaPredicted RBP24.09■■□□□ 1.45
VPS72-207ENST00000640458 PRPF40BQ6NWY9 871 aaKnown RBP24.09■■□□□ 1.45
VPS72-207ENST00000640458 TAF1DQ9H5J8 278 aaPredicted RBP24.09■■□□□ 1.45
VPS72-207ENST00000640458 CEMIPQ8WUJ3 1361 aa24.08■■□□□ 1.45
VPS72-207ENST00000640458 TEFQ10587 303 aa24.08■■□□□ 1.45
VPS72-207ENST00000640458 WBP1LQ9NX94 342 aa24.08■■□□□ 1.45
VPS72-207ENST00000640458 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
VPS72-207ENST00000640458 SOGA3Q5TF21 947 aa24.07■■□□□ 1.44
VPS72-207ENST00000640458 STYK1Q6J9G0 422 aa24.07■■□□□ 1.44
VPS72-207ENST00000640458 CNBD1Q8NA66 436 aa24.07■■□□□ 1.44
VPS72-207ENST00000640458 SETDB2Q96T68 719 aa24.07■■□□□ 1.44
VPS72-207ENST00000640458 CLEC11AQ9Y240 323 aa24.07■■□□□ 1.44
VPS72-207ENST00000640458 VIRMAQ69YN4 1812 aaKnown RBP24.07■■□□□ 1.44
VPS72-207ENST00000640458 SLX4Q8IY92 1834 aa24.07■■□□□ 1.44
VPS72-207ENST00000640458 ITGBL1O95965 494 aaPredicted RBP24.06■■□□□ 1.44
VPS72-207ENST00000640458 RTF1Q92541 710 aaKnown RBP24.06■■□□□ 1.44
VPS72-207ENST00000640458 L3MBTL3Q96JM7 780 aaPredicted RBP24.06■■□□□ 1.44
VPS72-207ENST00000640458 SRGNP10124 158 aa24.05■■□□□ 1.44
VPS72-207ENST00000640458 ST5P78524 1137 aa24.05■■□□□ 1.44
VPS72-207ENST00000640458 MASTLQ96GX5 879 aa24.05■■□□□ 1.44
VPS72-207ENST00000640458 NPM2Q86SE8 214 aaKnown RBP24.04■■□□□ 1.44
VPS72-207ENST00000640458 ABHD8Q96I13 439 aa24.04■■□□□ 1.44
VPS72-207ENST00000640458 ZNF496Q96IT1 587 aaPredicted RBP24.04■■□□□ 1.44
VPS72-207ENST00000640458 CACNA1SQ13698 1873 aa24.04■■□□□ 1.44
VPS72-207ENST00000640458 FAM161AQ3B820 660 aa24.03■■□□□ 1.44
VPS72-207ENST00000640458 UBR2Q8IWV8 1755 aa24.03■■□□□ 1.44
VPS72-207ENST00000640458 SCN4AP35499 1836 aa24.03■■□□□ 1.44
VPS72-207ENST00000640458 IL6STP40189 918 aaPredicted RBP24.02■■□□□ 1.44
VPS72-207ENST00000640458 NFE2L2Q16236 605 aa24.02■■□□□ 1.44
VPS72-207ENST00000640458 MCM10Q7L590 875 aa24.02■■□□□ 1.44
VPS72-207ENST00000640458 TEX13AQ9BXU3 409 aaPredicted RBP24.02■■□□□ 1.44
VPS72-207ENST00000640458 HACL1Q9UJ83 578 aa24.02■■□□□ 1.44
VPS72-207ENST00000640458 MAPK8IP3Q9UPT6 1336 aa24.02■■□□□ 1.44
VPS72-207ENST00000640458 SCN7AQ01118 1682 aa24.02■■□□□ 1.44
VPS72-207ENST00000640458 A1BGP04217 495 aa24.01■■□□□ 1.43
VPS72-207ENST00000640458 HSPA8P11142 646 aaKnown RBP24.01■■□□□ 1.43
VPS72-207ENST00000640458 DEFB115Q30KQ5 88 aa24.01■■□□□ 1.43
VPS72-207ENST00000640458 CCDC93Q567U6 631 aa24.01■■□□□ 1.43
VPS72-207ENST00000640458 ZNF541Q9H0D2 1346 aa24.01■■□□□ 1.43
VPS72-207ENST00000640458 HEG1Q9ULI3 1381 aa24.01■■□□□ 1.43
VPS72-207ENST00000640458 CAMTA2O94983 1202 aa24■■□□□ 1.43
VPS72-207ENST00000640458 EPHX2P34913 555 aa24■■□□□ 1.43
VPS72-207ENST00000640458 DCTN1Q14203 1278 aa24■■□□□ 1.43
VPS72-207ENST00000640458 ZNF790Q6PG37 636 aa24■■□□□ 1.43
VPS72-207ENST00000640458 ZNF277Q9NRM2 450 aaPredicted RBP24■■□□□ 1.43
VPS72-207ENST00000640458 BTBD11A6QL63 1104 aa23.99■■□□□ 1.43
VPS72-207ENST00000640458 WDR43Q15061 677 aaKnown RBP eCLIP23.99■■□□□ 1.43
VPS72-207ENST00000640458 C7orf43Q8WVR3 580 aa23.99■■□□□ 1.43
VPS72-207ENST00000640458 RASSF10A6NK89 507 aa23.98■■□□□ 1.43
VPS72-207ENST00000640458 MAP1SQ66K74 1059 aaPredicted RBP23.98■■□□□ 1.43
VPS72-207ENST00000640458 CNTROBQ8N137 903 aa23.98■■□□□ 1.43
VPS72-207ENST00000640458 MAP2K1Q02750 393 aaPredicted RBP23.97■■□□□ 1.43
VPS72-207ENST00000640458 FKBP4Q02790 459 aaKnown RBP eCLIP23.97■■□□□ 1.43
VPS72-207ENST00000640458 WDR33Q9C0J8 1336 aaKnown RBP23.97■■□□□ 1.43
VPS72-207ENST00000640458 ABT1Q9ULW3 272 aaKnown RBP23.97■■□□□ 1.43
VPS72-207ENST00000640458 SIPA1L3O60292 1781 aaPredicted RBP23.96■■□□□ 1.43
VPS72-207ENST00000640458 RNF123Q5XPI4 1314 aa23.96■■□□□ 1.43
VPS72-207ENST00000640458 PNMA8AQ86V59 439 aaPredicted RBP23.96■■□□□ 1.43
VPS72-207ENST00000640458 NBPF5PQ86XG9 351 aaPredicted RBP23.96■■□□□ 1.43
VPS72-207ENST00000640458 DZIP3Q86Y13 1208 aaKnown RBP23.96■■□□□ 1.43
VPS72-207ENST00000640458 ADAMTS8Q9UP79 889 aa23.96■■□□□ 1.43
VPS72-207ENST00000640458 ARFGEF2Q9Y6D5 1785 aa23.96■■□□□ 1.43
VPS72-207ENST00000640458 NPR1P16066 1061 aa23.95■■□□□ 1.42
VPS72-207ENST00000640458 OLFM4Q6UX06 510 aa23.95■■□□□ 1.42
VPS72-207ENST00000640458 FMNL2Q96PY5 1086 aa23.95■■□□□ 1.42
VPS72-207ENST00000640458 KCNQ3O43525 872 aa23.94■■□□□ 1.42
VPS72-207ENST00000640458 TAF7Q15545 349 aaPredicted RBP23.94■■□□□ 1.42
VPS72-207ENST00000640458 CCDC85CA6NKD9 419 aa23.93■■□□□ 1.42
VPS72-207ENST00000640458 ANP32CO43423 234 aa23.93■■□□□ 1.42
VPS72-207ENST00000640458 TMPOP42166 694 aaKnown RBP23.93■■□□□ 1.42
VPS72-207ENST00000640458 PIP4K2AP48426 406 aaPredicted RBP23.93■■□□□ 1.42
VPS72-207ENST00000640458 RUNDC1Q96C34 613 aa23.93■■□□□ 1.42
VPS72-207ENST00000640458 RIPK4P57078 832 aa23.92■■□□□ 1.42
VPS72-207ENST00000640458 CCDC146Q8IYE0 955 aa23.92■■□□□ 1.42
VPS72-207ENST00000640458 RTKN2Q8IZC4 609 aa23.92■■□□□ 1.42
VPS72-207ENST00000640458 ADAMTSL1Q8N6G6 1762 aa23.91■■□□□ 1.42
VPS72-207ENST00000640458 PAXIP1Q6ZW49 1069 aaPredicted RBP23.91■■□□□ 1.42
VPS72-207ENST00000640458 IARSP41252 1262 aaKnown RBP23.9■■□□□ 1.42
VPS72-207ENST00000640458 MLLT1Q03111 559 aaPredicted RBP23.9■■□□□ 1.42
VPS72-207ENST00000640458 GRM1Q13255 1194 aa23.9■■□□□ 1.42
VPS72-207ENST00000640458 SYNE4Q8N205 404 aa23.9■■□□□ 1.42
VPS72-207ENST00000640458 PNISRQ8TF01 805 aaKnown RBP23.9■■□□□ 1.42
VPS72-207ENST00000640458 FZD9O00144 591 aa23.89■■□□□ 1.41
VPS72-207ENST00000640458 THUMPD2Q9BTF0 503 aaKnown RBP23.89■■□□□ 1.41
VPS72-207ENST00000640458 BEGAINQ9BUH8 593 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms