RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	PXDNL	A1KZ92	1463 aa		13.11	□□□□□ -0.31
NECAP1-223	ENST00000640091	ANKRD44	Q8N8A2	993 aa		13.11	□□□□□ -0.31
NECAP1-223	ENST00000640091	PDZRN3	Q9UPQ7	1066 aa		13.11	□□□□□ -0.31
NECAP1-223	ENST00000640091	ATP10D	Q9P241	1426 aa		13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	ALDH1L1	O75891	902 aa		13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	KRT27	Q7Z3Y8	459 aa		13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	JARID2	Q92833	1246 aa	Predicted RBP	13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	NEURL1B	A8MQ27	555 aa		13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	SMC5	Q8IY18	1101 aa		13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	BCL11A	Q9H165	835 aa		13.1	□□□□□ -0.31
NECAP1-223	ENST00000640091	LAMB4	A4D0S4	1761 aa		13.09	□□□□□ -0.31
NECAP1-223	ENST00000640091	CRKL	P46109	303 aa	Known RBP	13.09	□□□□□ -0.31
NECAP1-223	ENST00000640091	INTS5	Q6P9B9	1019 aa	Known RBP	13.09	□□□□□ -0.31
NECAP1-223	ENST00000640091	RGS17	Q9UGC6	210 aa	Predicted RBP	13.09	□□□□□ -0.31
NECAP1-223	ENST00000640091	PNMA6E	A0A0J9YXQ4	647 aa		13.09	□□□□□ -0.31
NECAP1-223	ENST00000640091	GRM8	O00222	908 aa		13.08	□□□□□ -0.32
NECAP1-223	ENST00000640091	RXRB	P28702	533 aa		13.08	□□□□□ -0.32
NECAP1-223	ENST00000640091	GCKR	Q14397	625 aa		13.08	□□□□□ -0.32
NECAP1-223	ENST00000640091	ANKRD45	Q5TZF3	282 aa		13.08	□□□□□ -0.32
NECAP1-223	ENST00000640091	TBC1D2B	Q9UPU7	963 aa		13.08	□□□□□ -0.32
NECAP1-223	ENST00000640091	APBB1	O00213	710 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	ATP8B2	P98198	1209 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	NPM2	Q86SE8	214 aa	Known RBP	13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	CCDC87	Q9NVE4	849 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	TRIM37	O94972	964 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	IL6ST	P40189	918 aa	Predicted RBP	13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	HLF	Q16534	295 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	RTL5	Q5HYW3	569 aa	Predicted RBP	13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	KIF6	Q6ZMV9	814 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	FAM196A	Q6ZSG2	479 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	LINC00116	Q8NCU8	138 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	GCC1	Q96CN9	775 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	DCTPP1	Q9H773	170 aa		13.07	□□□□□ -0.32
NECAP1-223	ENST00000640091	POTEA	Q6S8J7	498 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	SMIM5	Q71RC9	77 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	PPP1R42	Q7Z4L9	355 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	LNPK	Q9C0E8	428 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091		A0A087WZG4	1122 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	EIF5	P55010	431 aa	Known RBP	13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	DZIP3	Q86Y13	1208 aa	Known RBP	13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	KAZALD1	Q96I82	304 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	SUCLG2	Q96I99	432 aa		13.06	□□□□□ -0.32
NECAP1-223	ENST00000640091	HMMR	O75330	724 aa		13.05	□□□□□ -0.32
NECAP1-223	ENST00000640091	NUCB1	Q02818	461 aa		13.05	□□□□□ -0.32
NECAP1-223	ENST00000640091	UBE3B	Q7Z3V4	1068 aa		13.05	□□□□□ -0.32
NECAP1-223	ENST00000640091	CCNL1	Q9UK58	526 aa	Predicted RBP	13.05	□□□□□ -0.32
NECAP1-223	ENST00000640091	MAP3K15	Q6ZN16	1313 aa		13.05	□□□□□ -0.32
NECAP1-223	ENST00000640091	SRGAP3	O43295	1099 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	TCIRG1	Q13488	830 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	CHD1L	Q86WJ1	897 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	TSHZ2	Q9NRE2	1034 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	EXOC6B	Q9Y2D4	811 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	TJP1	Q07157	1748 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	UTY	O14607	1347 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	GPT	P24298	496 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	PDE4A	P27815	886 aa		13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	BICC1	Q9H694	974 aa	Known RBP	13.04	□□□□□ -0.32
NECAP1-223	ENST00000640091	EPHA10	Q5JZY3	1008 aa		13.03	□□□□□ -0.32
NECAP1-223	ENST00000640091	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.03	□□□□□ -0.32
NECAP1-223	ENST00000640091	CWC25	Q9NXE8	425 aa	Predicted RBP	13.03	□□□□□ -0.32
NECAP1-223	ENST00000640091	SMARCA5	O60264	1052 aa	Predicted RBP	13.03	□□□□□ -0.32
NECAP1-223	ENST00000640091	SSH3	Q8TE77	659 aa		13.03	□□□□□ -0.32
NECAP1-223	ENST00000640091	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091	CCDC191	Q8NCU4	936 aa		13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091	ISCA1	Q9BUE6	129 aa		13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091	BTAF1	O14981	1849 aa		13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091	BRWD3	Q6RI45	1802 aa		13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091	ARFGEF2	Q9Y6D5	1785 aa		13.02	□□□□□ -0.33
NECAP1-223	ENST00000640091		H7C1W4	665 aa		13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	LRRC4B	Q9NT99	713 aa		13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	NHS	Q6T4R5	1651 aa		13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	SURF6	O75683	361 aa	Known RBP	13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	CASP7	P55210	303 aa		13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	POLA2	Q14181	598 aa		13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	HDAC5	Q9UQL6	1122 aa		13.01	□□□□□ -0.33
NECAP1-223	ENST00000640091	MYH14	Q7Z406	1995 aa	Known RBP	13	□□□□□ -0.33
NECAP1-223	ENST00000640091	ERVV-1	B6SEH8	477 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	SYNE4	Q8N205	404 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	FAM89A	Q96GI7	184 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	SBF2	Q86WG5	1849 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	GNPAT	O15228	680 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	MTX1	Q13505	466 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	AMIGO3	Q86WK7	504 aa		13	□□□□□ -0.33
NECAP1-223	ENST00000640091	PA2G4	Q9UQ80	394 aa	Known RBP	13	□□□□□ -0.33
NECAP1-223	ENST00000640091	CAMTA2	O94983	1202 aa		12.99	□□□□□ -0.33
NECAP1-223	ENST00000640091	TRIM28	Q13263	835 aa	Known RBP	12.99	□□□□□ -0.33
NECAP1-223	ENST00000640091	NLRP10	Q86W26	655 aa		12.99	□□□□□ -0.33
NECAP1-223	ENST00000640091	KLHDC4	Q8TBB5	520 aa		12.99	□□□□□ -0.33
NECAP1-223	ENST00000640091	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.99	□□□□□ -0.33
NECAP1-223	ENST00000640091	COL15A1	P39059	1388 aa		12.99	□□□□□ -0.33
NECAP1-223	ENST00000640091	CNTNAP4	Q9C0A0	1308 aa		12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	FAM177B	A6PVY3	158 aa		12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	HSP90AB3P	Q58FF7	597 aa		12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	NUP188	Q5SRE5	1749 aa		12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	RC3H1	Q5TC82	1133 aa	Known RBP	12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	LMBR1L	Q6UX01	489 aa		12.98	□□□□□ -0.33
NECAP1-223	ENST00000640091	PROM2	Q8N271	834 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms