RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 HSPA4P34932 840 aa22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 CUL4AQ13619 759 aa22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 ZNF790Q6PG37 636 aa22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 NOL8Q76FK4 1167 aaKnown RBP22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 LMBRD1Q9NUN5 540 aa22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 LINS1Q8NG48 757 aa22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 UPF3BQ9BZI7 483 aaKnown RBP22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 SLC52A2Q9HAB3 445 aa22.97■■□□□ 1.27
CROCCP2-206ENST00000639594 TTC41PQ6P2S7 1318 aa22.96■■□□□ 1.27
CROCCP2-206ENST00000639594 SUCLG2Q96I99 432 aa22.96■■□□□ 1.27
CROCCP2-206ENST00000639594 GRM8O00222 908 aa22.96■■□□□ 1.27
CROCCP2-206ENST00000639594 DDX58O95786 925 aaKnown RBP22.96■■□□□ 1.27
CROCCP2-206ENST00000639594 TATP17735 454 aaPredicted RBP22.96■■□□□ 1.27
CROCCP2-206ENST00000639594 CLASRPQ8N2M8 674 aaKnown RBP22.96■■□□□ 1.27
CROCCP2-206ENST00000639594 MEGF6O75095 1541 aa22.95■■□□□ 1.26
CROCCP2-206ENST00000639594 PHKG2P15735 406 aa22.95■■□□□ 1.26
CROCCP2-206ENST00000639594 NFATC2IPQ8NCF5 419 aa22.95■■□□□ 1.26
CROCCP2-206ENST00000639594 KAZALD1Q96I82 304 aa22.95■■□□□ 1.26
CROCCP2-206ENST00000639594 GLRX3O76003 335 aaKnown RBP22.94■■□□□ 1.26
CROCCP2-206ENST00000639594 HDAC5Q9UQL6 1122 aa22.94■■□□□ 1.26
CROCCP2-206ENST00000639594 UTYO14607 1347 aa22.94■■□□□ 1.26
CROCCP2-206ENST00000639594 RAD50Q92878 1312 aa22.94■■□□□ 1.26
CROCCP2-206ENST00000639594 CHRNA2Q15822 529 aa22.94■■□□□ 1.26
CROCCP2-206ENST00000639594 LSG1Q9H089 658 aaKnown RBP22.94■■□□□ 1.26
CROCCP2-206ENST00000639594 SPG7Q9UQ90 795 aa22.93■■□□□ 1.26
CROCCP2-206ENST00000639594 CWC27Q6UX04 472 aaKnown RBP22.93■■□□□ 1.26
CROCCP2-206ENST00000639594 CHAMP1Q96JM3 812 aa22.93■■□□□ 1.26
CROCCP2-206ENST00000639594 BICC1Q9H694 974 aaKnown RBP22.93■■□□□ 1.26
CROCCP2-206ENST00000639594 IGKV5-2P06315 115 aa22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 MYL6BP14649 208 aa22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 FOXD4L5Q5VV16 416 aaPredicted RBP22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 RIC3Q7Z5B4 369 aa22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 ERC1Q8IUD2 1116 aa22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 FOXD4L4Q8WXT5 416 aaPredicted RBP22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 ABCA3Q99758 1704 aa22.92■■□□□ 1.26
CROCCP2-206ENST00000639594 INTS4Q96HW7 963 aaKnown RBP22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 RRAGDQ9NQL2 400 aaPredicted RBP22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 ROBO1Q9Y6N7 1651 aa22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 PRPF40AO75400 957 aaKnown RBP22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 CSB-PGBD3P0DP91 1061 aa22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 ECHDC1Q9NTX5 307 aa22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 SNX14Q9Y5W7 946 aa22.91■■□□□ 1.26
CROCCP2-206ENST00000639594 IFIT2P09913 472 aaKnown RBP22.9■■□□□ 1.26
CROCCP2-206ENST00000639594 NCLP19338 710 aaKnown RBP22.9■■□□□ 1.26
CROCCP2-206ENST00000639594 IFNL2Q8IZJ0 200 aa22.9■■□□□ 1.26
CROCCP2-206ENST00000639594 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.9■■□□□ 1.26
CROCCP2-206ENST00000639594 AFDNP55196 1824 aaKnown RBP22.9■■□□□ 1.26
CROCCP2-206ENST00000639594 ZNF496Q96IT1 587 aaPredicted RBP22.9■■□□□ 1.26
CROCCP2-206ENST00000639594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.9■■□□□ 1.263e-6■□□□□ 8.8
CROCCP2-206ENST00000639594 SASH1O94885 1247 aa22.89■■□□□ 1.26
CROCCP2-206ENST00000639594 BRD1O95696 1058 aa22.89■■□□□ 1.26
CROCCP2-206ENST00000639594 LARP1Q6PKG0 1096 aaKnown RBP22.89■■□□□ 1.26
CROCCP2-206ENST00000639594 AACSQ86V21 672 aa22.89■■□□□ 1.26
CROCCP2-206ENST00000639594 XAGE3Q8WTP9 111 aa22.89■■□□□ 1.26
CROCCP2-206ENST00000639594 PKD1L3Q7Z443 1732 aa22.89■■□□□ 1.25
CROCCP2-206ENST00000639594 CAVIN1Q6NZI2 390 aaKnown RBP22.89■■□□□ 1.25
CROCCP2-206ENST00000639594 RASEFQ8IZ41 740 aa22.89■■□□□ 1.25
CROCCP2-206ENST00000639594 ABCC6O95255 1503 aa22.88■■□□□ 1.25
CROCCP2-206ENST00000639594 KIAA1211Q6ZU35 1233 aa22.88■■□□□ 1.25
CROCCP2-206ENST00000639594 COPS6Q7L5N1 327 aa22.88■■□□□ 1.25
CROCCP2-206ENST00000639594 GPATCH3Q96I76 525 aa22.88■■□□□ 1.25
CROCCP2-206ENST00000639594 TCHHQ07283 1943 aa22.88■■□□□ 1.25
CROCCP2-206ENST00000639594 NEURL1BA8MQ27 555 aa22.87■■□□□ 1.25
CROCCP2-206ENST00000639594 DIAPH3Q9NSV4 1193 aa22.87■■□□□ 1.25
CROCCP2-206ENST00000639594 CYP27B1O15528 508 aa22.87■■□□□ 1.25
CROCCP2-206ENST00000639594 G3BP1Q13283 466 aaKnown RBP eCLIP22.87■■□□□ 1.25
CROCCP2-206ENST00000639594 GPT2Q8TD30 523 aa22.87■■□□□ 1.25
CROCCP2-206ENST00000639594 USP16Q9Y5T5 823 aa22.87■■□□□ 1.25
CROCCP2-206ENST00000639594 CPDO75976 1380 aa22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 MYD88Q99836 296 aa22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 MRC1P22897 1456 aa22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 NEXNQ0ZGT2 675 aa22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 EAF2Q96CJ1 260 aaPredicted RBP22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 TTC14Q96N46 770 aa22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 METTL22Q9BUU2 404 aaPredicted RBP22.86■■□□□ 1.25
CROCCP2-206ENST00000639594 PIP4K2AP48426 406 aaPredicted RBP22.85■■□□□ 1.25
CROCCP2-206ENST00000639594 GCKRQ14397 625 aa22.85■■□□□ 1.25
CROCCP2-206ENST00000639594 RUFY2Q8WXA3 655 aa22.85■■□□□ 1.25
CROCCP2-206ENST00000639594 CCDC8Q9H0W5 538 aaPredicted RBP22.85■■□□□ 1.25
CROCCP2-206ENST00000639594 ZNF445P59923 1031 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 PTH1RQ03431 593 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 ZSCAN23Q3MJ62 389 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 LRP10Q7Z4F1 713 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 DCAF5Q96JK2 942 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 SIL1Q9H173 461 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 ARFGEF2Q9Y6D5 1785 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 EVI5LQ96CN4 794 aa22.84■■□□□ 1.25
CROCCP2-206ENST00000639594 SNRPA1P09661 255 aaKnown RBP22.83■■□□□ 1.25
CROCCP2-206ENST00000639594 EPHA10Q5JZY3 1008 aa22.83■■□□□ 1.25
CROCCP2-206ENST00000639594 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
CROCCP2-206ENST00000639594 KLHDC4Q8TBB5 520 aa22.83■■□□□ 1.25
CROCCP2-206ENST00000639594 AK2P54819 239 aa22.83■■□□□ 1.24
CROCCP2-206ENST00000639594 TLR7Q9NYK1 1049 aaKnown RBP22.83■■□□□ 1.24
CROCCP2-206ENST00000639594 RBM27Q9P2N5 1060 aaKnown RBP22.83■■□□□ 1.24
CROCCP2-206ENST00000639594 ANKRD13DQ6ZTN6 518 aa22.82■■□□□ 1.24
CROCCP2-206ENST00000639594 NSFL1CQ9UNZ2 370 aaKnown RBP22.82■■□□□ 1.24
CROCCP2-206ENST00000639594 JARID2Q92833 1246 aaPredicted RBP22.81■■□□□ 1.24
CROCCP2-206ENST00000639594 LARP6Q9BRS8 491 aaKnown RBP22.81■■□□□ 1.24
CROCCP2-206ENST00000639594 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
CROCCP2-206ENST00000639594 CPA1P15085 419 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms