RNA–Protein interactions for RNA: ENST00000638578.1

STRADA-228, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 3

Gene STRADA, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-228ENST00000638578 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
STRADA-228ENST00000638578 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
STRADA-228ENST00000638578 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
STRADA-228ENST00000638578 ZNF622Q969S3 477 aaKnown RBP eCLIP10.28□□□□□ -0.76
STRADA-228ENST00000638578 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
STRADA-228ENST00000638578 C21orf2O43822 256 aa10.27□□□□□ -0.77
STRADA-228ENST00000638578 STARD3NLO95772 234 aa10.27□□□□□ -0.77
STRADA-228ENST00000638578 POTEIP0CG38 1075 aa10.27□□□□□ -0.77
STRADA-228ENST00000638578 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
STRADA-228ENST00000638578 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
STRADA-228ENST00000638578 RNMTO43148 476 aaKnown RBP10.26□□□□□ -0.77
STRADA-228ENST00000638578 DDNO94850 711 aaPredicted RBP10.26□□□□□ -0.77
STRADA-228ENST00000638578 CANXP27824 592 aaKnown RBP10.26□□□□□ -0.77
STRADA-228ENST00000638578 VEGFBP49765 207 aa10.26□□□□□ -0.77
STRADA-228ENST00000638578 EIF5P55010 431 aaKnown RBP10.26□□□□□ -0.77
STRADA-228ENST00000638578 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
STRADA-228ENST00000638578 WBP1LQ9NX94 342 aa10.26□□□□□ -0.77
STRADA-228ENST00000638578 PCDH10Q9P2E7 1040 aa10.26□□□□□ -0.77
STRADA-228ENST00000638578 LAMB4A4D0S4 1761 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 RASSF10A6NK89 507 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 NPHP1O15259 732 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 ST5P78524 1137 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 MAP2K1Q02750 393 aaPredicted RBP10.25□□□□□ -0.77
STRADA-228ENST00000638578 SLC39A6Q13433 755 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 TBC1D9BQ66K14 1250 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 PRR5LQ6MZQ0 368 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 BICDL1Q6ZP65 573 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 MORC1Q86VD1 984 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 TTC5Q8N0Z6 440 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 CNBD1Q8NA66 436 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 ABHD8Q96I13 439 aa10.25□□□□□ -0.77
STRADA-228ENST00000638578 TAF1DQ9H5J8 278 aaPredicted RBP10.25□□□□□ -0.77
STRADA-228ENST00000638578 IL13P35225 146 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 LBX1P52954 281 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
STRADA-228ENST00000638578 NPM2Q86SE8 214 aaKnown RBP10.24□□□□□ -0.77
STRADA-228ENST00000638578 PNMA8AQ86V59 439 aaPredicted RBP10.24□□□□□ -0.77
STRADA-228ENST00000638578 MASTLQ96GX5 879 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 POLR3GLQ9BT43 218 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 TEX13AQ9BXU3 409 aaPredicted RBP10.24□□□□□ -0.77
STRADA-228ENST00000638578 LGR6Q9HBX8 967 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 HACL1Q9UJ83 578 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 HEG1Q9ULI3 1381 aa10.24□□□□□ -0.77
STRADA-228ENST00000638578 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
STRADA-228ENST00000638578 SRGNP10124 158 aa10.23□□□□□ -0.77
STRADA-228ENST00000638578 HSPA8P11142 646 aaKnown RBP10.23□□□□□ -0.77
STRADA-228ENST00000638578 IL6STP40189 918 aaPredicted RBP10.23□□□□□ -0.77
STRADA-228ENST00000638578 CCDC93Q567U6 631 aa10.23□□□□□ -0.77
STRADA-228ENST00000638578 EAPPQ56P03 285 aaPredicted RBP10.23□□□□□ -0.77
STRADA-228ENST00000638578 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
STRADA-228ENST00000638578 TIMELESSQ9UNS1 1208 aa10.23□□□□□ -0.77
STRADA-228ENST00000638578 LTBP1Q14766 1721 aa10.23□□□□□ -0.77
STRADA-228ENST00000638578 NUP98P52948 1817 aa10.23□□□□□ -0.77
STRADA-228ENST00000638578 EPHX2P34913 555 aa10.22□□□□□ -0.77
STRADA-228ENST00000638578 MLLT1Q03111 559 aaPredicted RBP10.22□□□□□ -0.77
STRADA-228ENST00000638578 DEFB115Q30KQ5 88 aa10.22□□□□□ -0.77
STRADA-228ENST00000638578 POTEHQ6S545 545 aa10.22□□□□□ -0.77
STRADA-228ENST00000638578 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
STRADA-228ENST00000638578 CASP8AP2Q9UKL3 1982 aa10.21□□□□□ -0.77
STRADA-228ENST00000638578 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.77
STRADA-228ENST00000638578 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.77
STRADA-228ENST00000638578 BEGAINQ9BUH8 593 aa10.21□□□□□ -0.77
STRADA-228ENST00000638578 PANK3Q9H999 370 aa10.21□□□□□ -0.77
STRADA-228ENST00000638578 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.77
STRADA-228ENST00000638578 WDR33Q9C0J8 1336 aaKnown RBP10.21□□□□□ -0.78
STRADA-228ENST00000638578 NPR1P16066 1061 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 ECE1P42892 770 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 RGS19P49795 217 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 TEFQ10587 303 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 RTKN2Q8IZC4 609 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 ZNF541Q9H0D2 1346 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 ZNF652Q9Y2D9 606 aa10.2□□□□□ -0.78
STRADA-228ENST00000638578 CLSPNQ9HAW4 1339 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 CAMTA2O94983 1202 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 MTHFSDQ2M296 383 aaKnown RBP10.19□□□□□ -0.78
STRADA-228ENST00000638578 ZNF790Q6PG37 636 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 GPC2Q8N158 579 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 CCDC24Q8N4L8 307 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 C7orf43Q8WVR3 580 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 ZNF496Q96IT1 587 aaPredicted RBP10.19□□□□□ -0.78
STRADA-228ENST00000638578 FMNL2Q96PY5 1086 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 ABT1Q9ULW3 272 aaKnown RBP10.19□□□□□ -0.78
STRADA-228ENST00000638578 TBC1D2BQ9UPU7 963 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 KNSTRNQ9Y448 316 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 AKAP11Q9UKA4 1901 aa10.19□□□□□ -0.78
STRADA-228ENST00000638578 RNF123Q5XPI4 1314 aa10.18□□□□□ -0.78
STRADA-228ENST00000638578 FZD9O00144 591 aa10.18□□□□□ -0.78
STRADA-228ENST00000638578 RGL2O15211 777 aa10.18□□□□□ -0.78
STRADA-228ENST00000638578 HMOX1P09601 288 aa10.18□□□□□ -0.78
STRADA-228ENST00000638578 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
STRADA-228ENST00000638578 IARSP41252 1262 aaKnown RBP10.18□□□□□ -0.78
STRADA-228ENST00000638578 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
STRADA-228ENST00000638578 NBPF5PQ86XG9 351 aaPredicted RBP10.18□□□□□ -0.78
STRADA-228ENST00000638578 DZIP3Q86Y13 1208 aaKnown RBP10.18□□□□□ -0.78
STRADA-228ENST00000638578 KLRG2A4D1S0 409 aaPredicted RBP10.17□□□□□ -0.78
STRADA-228ENST00000638578 LMOD1P29536 600 aaPredicted RBP10.17□□□□□ -0.78
STRADA-228ENST00000638578 EIF4G2P78344 907 aaKnown RBP eCLIP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms