RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CASC1Q6TDU7 716 aa14.45□□□□□ -0.1
GFAP-228ENST00000638488 G2E3Q7L622 706 aa14.45□□□□□ -0.1
GFAP-228ENST00000638488 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
GFAP-228ENST00000638488 FUCA2Q9BTY2 467 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 GADD45BO75293 160 aaPredicted RBP14.44□□□□□ -0.1
GFAP-228ENST00000638488 HNRNPH2P55795 449 aaKnown RBP14.44□□□□□ -0.1
GFAP-228ENST00000638488 RAD51AP2Q09MP3 1159 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 KMT5BQ4FZB7 885 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 USP48Q86UV5 1035 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 TMX3Q96JJ7 454 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 KIAA0232Q92628 1395 aa14.44□□□□□ -0.1
GFAP-228ENST00000638488 NPHP4O75161 1426 aaPredicted RBP14.43□□□□□ -0.1
GFAP-228ENST00000638488 TNNT1P13805 278 aa14.43□□□□□ -0.1
GFAP-228ENST00000638488 MUM1L1Q5H9M0 696 aa14.43□□□□□ -0.1
GFAP-228ENST00000638488 MSH6P52701 1360 aa14.43□□□□□ -0.1
GFAP-228ENST00000638488 BRD2P25440 801 aaKnown RBP14.43□□□□□ -0.1
GFAP-228ENST00000638488 FOXD4L5Q5VV16 416 aaPredicted RBP14.43□□□□□ -0.1
GFAP-228ENST00000638488 FOXD4L4Q8WXT5 416 aaPredicted RBP14.43□□□□□ -0.1
GFAP-228ENST00000638488 LRRC59Q96AG4 307 aaKnown RBP14.43□□□□□ -0.1
GFAP-228ENST00000638488 NOL10Q9BSC4 688 aaKnown RBP14.43□□□□□ -0.1
GFAP-228ENST00000638488 MARF1Q9Y4F3 1742 aaKnown RBP14.42□□□□□ -0.1
GFAP-228ENST00000638488 RNF20Q5VTR2 975 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 PROSER2Q86WR7 435 aaPredicted RBP14.42□□□□□ -0.1
GFAP-228ENST00000638488 IL17REQ8NFR9 667 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 MEIS3Q99687 375 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 ADGRL3Q9HAR2 1447 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 WDR33Q9C0J8 1336 aaKnown RBP14.42□□□□□ -0.1
GFAP-228ENST00000638488 NBPF6Q5VWK0 638 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 CERS3Q8IU89 383 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 NBPF4Q96M43 638 aa14.42□□□□□ -0.1
GFAP-228ENST00000638488 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.42□□□□□ -0.1
GFAP-228ENST00000638488 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
GFAP-228ENST00000638488 STK31Q9BXU1 1019 aa14.41□□□□□ -0.1
GFAP-228ENST00000638488 ZNF142P52746 1687 aaPredicted RBP14.41□□□□□ -0.1
GFAP-228ENST00000638488 ADAMTSL3P82987 1691 aa14.41□□□□□ -0.1
GFAP-228ENST00000638488 RGS12O14924 1447 aa14.41□□□□□ -0.1
GFAP-228ENST00000638488 AP5Z1O43299 807 aa14.41□□□□□ -0.1
GFAP-228ENST00000638488 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
GFAP-228ENST00000638488 IP6K1Q92551 441 aa14.41□□□□□ -0.1
GFAP-228ENST00000638488 C16orf45Q96MC5 204 aaPredicted RBP14.41□□□□□ -0.1
GFAP-228ENST00000638488 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
GFAP-228ENST00000638488 PTPRCP08575 1304 aa14.4□□□□□ -0.1
GFAP-228ENST00000638488 MAP3K5Q99683 1374 aa14.4□□□□□ -0.1
GFAP-228ENST00000638488 UBE2HP62256 183 aa14.4□□□□□ -0.1
GFAP-228ENST00000638488 RASSF4Q9H2L5 321 aa14.4□□□□□ -0.1
GFAP-228ENST00000638488 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.4□□□□□ -0.1
GFAP-228ENST00000638488 TCHHQ07283 1943 aa14.4□□□□□ -0.1
GFAP-228ENST00000638488 RPAP1Q9BWH6 1393 aaPredicted RBP14.4□□□□□ -0.1
GFAP-228ENST00000638488 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
GFAP-228ENST00000638488 ERO1AQ96HE7 468 aa14.4□□□□□ -0.1
GFAP-228ENST00000638488 LTN1O94822 1766 aa14.39□□□□□ -0.11
GFAP-228ENST00000638488 PTGS1P23219 599 aa14.39□□□□□ -0.11
GFAP-228ENST00000638488 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
GFAP-228ENST00000638488 NOP2P46087 812 aaKnown RBP14.39□□□□□ -0.11
GFAP-228ENST00000638488 SPC24Q8NBT2 197 aa14.39□□□□□ -0.11
GFAP-228ENST00000638488 NWD1Q149M9 1564 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 SMARCA5O60264 1052 aaPredicted RBP14.38□□□□□ -0.11
GFAP-228ENST00000638488 GCP02774 474 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 PLCB2Q00722 1185 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 C16orf71Q8IYS4 520 aaPredicted RBP14.38□□□□□ -0.11
GFAP-228ENST00000638488 TXLNBQ8N3L3 684 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 KIF24Q5T7B8 1368 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 TAF7Q15545 349 aaPredicted RBP14.38□□□□□ -0.11
GFAP-228ENST00000638488 LGR6Q9HBX8 967 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 RAD50Q92878 1312 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 RTL1A6NKG5 1358 aa14.38□□□□□ -0.11
GFAP-228ENST00000638488 ERC2O15083 957 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 HTATSF1O43719 755 aaKnown RBP14.37□□□□□ -0.11
GFAP-228ENST00000638488 AXDND1Q5T1B0 1012 aaPredicted RBP14.37□□□□□ -0.11
GFAP-228ENST00000638488 CEP85Q6P2H3 762 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.37□□□□□ -0.11
GFAP-228ENST00000638488 RSPH14Q9UHP6 348 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 CCDC171Q6TFL3 1326 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 CLGNO14967 610 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
GFAP-228ENST00000638488 PSEN1P49768 467 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 NEK4P51957 841 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 CCDC30Q5VVM6 783 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
GFAP-228ENST00000638488 DDX17Q92841 729 aaKnown RBP14.37□□□□□ -0.11
GFAP-228ENST00000638488 FLIIQ13045 1269 aa14.36□□□□□ -0.11
GFAP-228ENST00000638488 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
GFAP-228ENST00000638488 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
GFAP-228ENST00000638488 TEX35Q5T0J7 233 aa14.36□□□□□ -0.11
GFAP-228ENST00000638488 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
GFAP-228ENST00000638488 ZC3H6P61129 1189 aaKnown RBP14.35□□□□□ -0.11
GFAP-228ENST00000638488 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 BRMS1Q9HCU9 246 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 DHX16O60231 1041 aaKnown RBP14.35□□□□□ -0.11
GFAP-228ENST00000638488 CCDC192P0DO97 292 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 SDSP20132 328 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 TPD52L1Q16890 204 aaPredicted RBP14.35□□□□□ -0.11
GFAP-228ENST00000638488 ZNF530Q6P9A1 599 aaPredicted RBP14.35□□□□□ -0.11
GFAP-228ENST00000638488 MPRIPQ6WCQ1 1025 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 FAM200AQ8TCP9 573 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 TRERF1Q96PN7 1200 aa14.35□□□□□ -0.11
GFAP-228ENST00000638488 ZNF215Q9UL58 517 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms