RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 COPS6Q7L5N1 327 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 PIGBQ92521 554 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 ASAP1Q9ULH1 1129 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 GNAI3P08754 354 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
ATM-226ENST00000638443 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 SLIT2O94813 1529 aa12.32□□□□□ -0.44
ATM-226ENST00000638443 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
ATM-226ENST00000638443 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
ATM-226ENST00000638443 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
ATM-226ENST00000638443 ITGB4P16144 1822 aa12.31□□□□□ -0.44
ATM-226ENST00000638443 A1BGP04217 495 aa12.31□□□□□ -0.44
ATM-226ENST00000638443 PROM2Q8N271 834 aa12.31□□□□□ -0.44
ATM-226ENST00000638443 LRP6O75581 1613 aa12.31□□□□□ -0.44
ATM-226ENST00000638443 DOT1LQ8TEK3 1739 aa12.3□□□□□ -0.44
ATM-226ENST00000638443 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
ATM-226ENST00000638443 RIC3Q7Z5B4 369 aa12.3□□□□□ -0.44
ATM-226ENST00000638443 A0A0G2JS52 829 aa12.29□□□□□ -0.44
ATM-226ENST00000638443 EXOC5O00471 708 aa12.29□□□□□ -0.44
ATM-226ENST00000638443 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
ATM-226ENST00000638443 MYD88Q99836 296 aa12.29□□□□□ -0.44
ATM-226ENST00000638443 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
ATM-226ENST00000638443 U3KPZ7 1027 aaPredicted RBP12.29□□□□□ -0.44
ATM-226ENST00000638443 SPATA31A5Q5VU36 1347 aa12.29□□□□□ -0.44
ATM-226ENST00000638443 SPATA31A7Q8IWB4 1347 aa12.29□□□□□ -0.44
ATM-226ENST00000638443 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 HMMRO75330 724 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
ATM-226ENST00000638443 ATP8B2P98198 1209 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 TSHZ3Q63HK5 1081 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 PPP1R42Q7Z4L9 355 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 ACSBG1Q96GR2 724 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 NWD2Q9ULI1 1742 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 BCL9O00512 1426 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 DDX58O95786 925 aaKnown RBP12.28□□□□□ -0.44
ATM-226ENST00000638443 PLEKHM2Q8IWE5 1019 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 SLC4A9Q96Q91 983 aa12.28□□□□□ -0.44
ATM-226ENST00000638443 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
ATM-226ENST00000638443 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
ATM-226ENST00000638443 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
ATM-226ENST00000638443 JCADQ9P266 1359 aa12.27□□□□□ -0.44
ATM-226ENST00000638443 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.45
ATM-226ENST00000638443 ATP5J2-PTCD1G3V325 749 aa12.27□□□□□ -0.45
ATM-226ENST00000638443 DDB1Q16531 1140 aa12.27□□□□□ -0.45
ATM-226ENST00000638443 DNAJC10Q8IXB1 793 aa12.27□□□□□ -0.45
ATM-226ENST00000638443 SUCLG2Q96I99 432 aa12.27□□□□□ -0.45
ATM-226ENST00000638443 ZNF330Q9Y3S2 320 aaPredicted RBP12.27□□□□□ -0.45
ATM-226ENST00000638443 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 NEURL1BA8MQ27 555 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 MARCH10Q8NA82 808 aaPredicted RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 LINS1Q8NG48 757 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 FAM177A1Q8N128 213 aaPredicted RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
ATM-226ENST00000638443 IPO9Q96P70 1041 aaKnown RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
ATM-226ENST00000638443 GRM8O00222 908 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
ATM-226ENST00000638443 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 IL1RAPL2Q9NP60 686 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 POLA2Q14181 598 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 BMP2KLQ5H9B9 411 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 UNC5CLQ8IV45 518 aa12.25□□□□□ -0.45
ATM-226ENST00000638443 BICC1Q9H694 974 aaKnown RBP12.25□□□□□ -0.45
ATM-226ENST00000638443 PA2G4Q9UQ80 394 aaKnown RBP12.25□□□□□ -0.45
ATM-226ENST00000638443 NUP188Q5SRE5 1749 aa12.24□□□□□ -0.45
ATM-226ENST00000638443 HSPA1LP34931 641 aa12.24□□□□□ -0.45
ATM-226ENST00000638443 AFDNP55196 1824 aaKnown RBP12.24□□□□□ -0.45
ATM-226ENST00000638443 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
ATM-226ENST00000638443 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
ATM-226ENST00000638443 THRAP3Q9Y2W1 955 aaKnown RBP12.24□□□□□ -0.45
ATM-226ENST00000638443 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
ATM-226ENST00000638443 NEXNQ0ZGT2 675 aa12.23□□□□□ -0.45
ATM-226ENST00000638443 GCKRQ14397 625 aa12.23□□□□□ -0.45
ATM-226ENST00000638443 TMCO4Q5TGY1 634 aa12.23□□□□□ -0.45
ATM-226ENST00000638443 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
ATM-226ENST00000638443 SLC4A3P48751 1232 aa12.23□□□□□ -0.45
ATM-226ENST00000638443 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
ATM-226ENST00000638443 LRRCC1Q9C099 1032 aa12.23□□□□□ -0.45
ATM-226ENST00000638443 UTYO14607 1347 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 TJP1Q07157 1748 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 KCNQ2O43526 872 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 UBE3BQ7Z3V4 1068 aa12.22□□□□□ -0.45
ATM-226ENST00000638443 PLBD2Q8NHP8 589 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms