RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 XIRP1Q702N8 1843 aaKnown RBP10.2□□□□□ -0.78
SCARB2-209ENST00000638409 LRPPRCP42704 1394 aaKnown RBP10.2□□□□□ -0.78
SCARB2-209ENST00000638409 CCDC194A0A1B0GVG4 234 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 ABCC11Q96J66 1382 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 TRPM1Q7Z4N2 1603 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 HOXA2O43364 376 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 LZTS3O60299 673 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-209ENST00000638409 ZSCAN29Q8IWY8 852 aaPredicted RBP10.2□□□□□ -0.78
SCARB2-209ENST00000638409 CERKQ8TCT0 537 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 MKNK1Q9BUB5 465 aa10.2□□□□□ -0.78
SCARB2-209ENST00000638409 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
SCARB2-209ENST00000638409 YTHDC2Q9H6S0 1430 aaKnown RBP10.19□□□□□ -0.78
SCARB2-209ENST00000638409 C3orf80F5H4A9 247 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 PMM1Q92871 262 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 DLC1Q96QB1 1528 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 OCLNQ16625 522 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 GTF3C2Q8WUA4 911 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-209ENST00000638409 CCDC136Q96JN2 1154 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
SCARB2-209ENST00000638409 DNMT3AQ9Y6K1 912 aaPredicted RBP10.19□□□□□ -0.78
SCARB2-209ENST00000638409 TEX2Q8IWB9 1127 aa10.18□□□□□ -0.78
SCARB2-209ENST00000638409 PLEKHM2Q8IWE5 1019 aa10.18□□□□□ -0.78
SCARB2-209ENST00000638409 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
SCARB2-209ENST00000638409 C21orf2O43822 256 aa10.18□□□□□ -0.78
SCARB2-209ENST00000638409 CLDN10P78369 228 aa10.18□□□□□ -0.78
SCARB2-209ENST00000638409 FAM135BQ49AJ0 1406 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 TGIF2Q9GZN2 237 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 IBSPP21815 317 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-209ENST00000638409 C6orf132Q5T0Z8 1188 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 TMEM132EQ6IEE7 984 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
SCARB2-209ENST00000638409 RGL4Q8IZJ4 473 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 MORC4Q8TE76 937 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 EGFL7Q9UHF1 273 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 COL4A3BPQ9Y5P4 624 aa10.17□□□□□ -0.78
SCARB2-209ENST00000638409 MTMR2Q13614 643 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 NBPF8Q3BBV2 869 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 TYW1BQ6NUM6 668 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 OGFOD1Q8N543 542 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 PRDM10Q9NQV6 1147 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 TMEM94Q12767 1356 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 ROBO2Q9HCK4 1378 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.16□□□□□ -0.78
SCARB2-209ENST00000638409 SWI5Q1ZZU3 235 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 FOXD4L6Q3SYB3 417 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-209ENST00000638409 FOXD4L3Q6VB84 417 aaPredicted RBP10.16□□□□□ -0.78
SCARB2-209ENST00000638409 RPUSD2Q8IZ73 545 aaKnown RBP10.16□□□□□ -0.78
SCARB2-209ENST00000638409 RDH13Q8NBN7 331 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 RALGAPBQ86X10 1494 aa10.16□□□□□ -0.78
SCARB2-209ENST00000638409 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
SCARB2-209ENST00000638409 SLC43A3Q8NBI5 491 aa10.15□□□□□ -0.78
SCARB2-209ENST00000638409 PARP2Q9UGN5 583 aa10.15□□□□□ -0.78
SCARB2-209ENST00000638409 NFATC2IPQ8NCF5 419 aa10.15□□□□□ -0.78
SCARB2-209ENST00000638409 C1orf216Q8TAB5 229 aa10.15□□□□□ -0.78
SCARB2-209ENST00000638409 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.78
SCARB2-209ENST00000638409 SYMPKQ92797 1274 aaKnown RBP10.15□□□□□ -0.78
SCARB2-209ENST00000638409 RBL2Q08999 1139 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 NBPF1Q3BBV0 1214 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 TAS1R3Q7RTX0 852 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 TMC7Q7Z402 723 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 RNF34Q969K3 372 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 CDCA7LQ96GN5 454 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 IFT57Q9NWB7 429 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 PCDHGB7Q9Y5F8 929 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 STAG1Q8WVM7 1258 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 SGSM3Q96HU1 749 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 OSBPL2Q9H1P3 480 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 KIAA1024Q9UPX6 916 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 DCCP43146 1447 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 ARHGEF28Q8N1W1 1705 aaKnown RBP10.14□□□□□ -0.79
SCARB2-209ENST00000638409 NR1H3Q13133 447 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 FILIP1Q7Z7B0 1213 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 SETDB2Q96T68 719 aa10.14□□□□□ -0.79
SCARB2-209ENST00000638409 CXXC1Q9P0U4 656 aaPredicted RBP10.14□□□□□ -0.79
SCARB2-209ENST00000638409 FMNL1O95466 1100 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-209ENST00000638409 EYA1Q99502 592 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 PCDH12Q9NPG4 1184 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 ADGRL3Q9HAR2 1447 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-209ENST00000638409 DUSP9Q99956 384 aaKnown RBP10.13□□□□□ -0.79
SCARB2-209ENST00000638409 C19orf44Q9H6X5 657 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
SCARB2-209ENST00000638409 ROCK2O75116 1388 aaKnown RBP10.12□□□□□ -0.79
SCARB2-209ENST00000638409 U2SURPO15042 1029 aaKnown RBP10.12□□□□□ -0.79
SCARB2-209ENST00000638409 GMLQ99445 158 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 STK26Q9P289 416 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 MSH6P52701 1360 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 PLEKHG6Q3KR16 790 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 PNMA1Q8ND90 353 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 IRF2BPLQ9H1B7 796 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
SCARB2-209ENST00000638409 NEFLP07196 543 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms