RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
GABRB3-225ENST00000638099 USP26Q9BXU7 913 aa9.7□□□□□ -0.86
GABRB3-225ENST00000638099 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 HSP90AB1P08238 724 aaKnown RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 LINS1Q8NG48 757 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 SYTL4Q96C24 671 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 PCDH11XQ9BZA7 1347 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 PCDH11YQ9BZA8 1340 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 PIP4K2BP78356 416 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 NOL8Q76FK4 1167 aaKnown RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 UBE3BQ7Z3V4 1068 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 HSP90AA1P07900 732 aaKnown RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 LRP10Q7Z4F1 713 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 NUTM2AQ8IVF1 878 aaPredicted RBP9.69□□□□□ -0.86
GABRB3-225ENST00000638099 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
GABRB3-225ENST00000638099 CARD10Q9BWT7 1032 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 CCDC8Q9H0W5 538 aaPredicted RBP9.68□□□□□ -0.86
GABRB3-225ENST00000638099 ANO2Q9NQ90 1003 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 ADAMTS7Q9UKP4 1686 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 N4BP2Q86UW6 1770 aaPredicted RBP9.68□□□□□ -0.86
GABRB3-225ENST00000638099 ALDH1L1O75891 902 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 NEXNQ0ZGT2 675 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 GCKRQ14397 625 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 OSBPL3Q9H4L5 887 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 TLR7Q9NYK1 1049 aaKnown RBP9.68□□□□□ -0.86
GABRB3-225ENST00000638099 CHMP3Q9Y3E7 222 aa9.68□□□□□ -0.86
GABRB3-225ENST00000638099 AK9Q5TCS8 1911 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 CASC1Q6TDU7 716 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 KIF1BPQ96EK5 621 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 METTL22Q9BUU2 404 aaPredicted RBP9.67□□□□□ -0.86
GABRB3-225ENST00000638099 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 NDUFB9Q9Y6M9 179 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 PKD1L3Q7Z443 1732 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 ERC2O15083 957 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 CHMLP26374 656 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 AACSQ86V21 672 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 PI4K2BQ8TCG2 481 aa9.67□□□□□ -0.86
GABRB3-225ENST00000638099 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
GABRB3-225ENST00000638099 A0A087WZG4 1122 aa9.66□□□□□ -0.86
GABRB3-225ENST00000638099 DTNBO60941 627 aa9.66□□□□□ -0.86
GABRB3-225ENST00000638099 SASH1O94885 1247 aa9.66□□□□□ -0.86
GABRB3-225ENST00000638099 PKNOX2Q96KN3 472 aa9.66□□□□□ -0.86
GABRB3-225ENST00000638099 ESYT1Q9BSJ8 1104 aa9.66□□□□□ -0.86
GABRB3-225ENST00000638099 CHMP4AQ9BY43 222 aa9.66□□□□□ -0.86
GABRB3-225ENST00000638099 PIGBQ92521 554 aa9.65□□□□□ -0.86
GABRB3-225ENST00000638099 ANO8Q9HCE9 1232 aaPredicted RBP9.65□□□□□ -0.86
GABRB3-225ENST00000638099 TMOD3Q9NYL9 352 aa9.65□□□□□ -0.86
GABRB3-225ENST00000638099 RAB11FIP3O75154 756 aa9.65□□□□□ -0.86
GABRB3-225ENST00000638099 CWC27Q6UX04 472 aaKnown RBP9.65□□□□□ -0.86
GABRB3-225ENST00000638099 DNAJC10Q8IXB1 793 aa9.65□□□□□ -0.86
GABRB3-225ENST00000638099 EAF2Q96CJ1 260 aaPredicted RBP9.65□□□□□ -0.86
GABRB3-225ENST00000638099 EDC3Q96F86 508 aaKnown RBP9.65□□□□□ -0.86
GABRB3-225ENST00000638099 STAP2Q9UGK3 403 aa9.65□□□□□ -0.86
GABRB3-225ENST00000638099 IFIT2P09913 472 aaKnown RBP9.64□□□□□ -0.87
GABRB3-225ENST00000638099 G3BP1Q13283 466 aaKnown RBP eCLIP9.64□□□□□ -0.87
GABRB3-225ENST00000638099 CLASRPQ8N2M8 674 aaKnown RBP9.64□□□□□ -0.87
GABRB3-225ENST00000638099 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
GABRB3-225ENST00000638099 K7ELQ4 463 aaPredicted RBP9.64□□□□□ -0.87
GABRB3-225ENST00000638099 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
GABRB3-225ENST00000638099 ROBO1Q9Y6N7 1651 aa9.64□□□□□ -0.87
GABRB3-225ENST00000638099 MRC1P22897 1456 aa9.64□□□□□ -0.87
GABRB3-225ENST00000638099 ERVV-2B6SEH9 535 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 REC8O95072 547 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 CHGBP05060 677 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 MTX1Q13505 466 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 SYNE4Q8N205 404 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 SNX21Q969T3 373 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 ACSBG1Q96GR2 724 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 GZF1Q9H116 711 aaPredicted RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 PARP4Q9UKK3 1724 aaKnown RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 SHANK3Q9BYB0 1731 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 LMBR1LQ6UX01 489 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 TUBGCP6Q96RT7 1819 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 GLI3P10071 1580 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 NHSL1Q5SYE7 1610 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 NEK4P51957 841 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 ZGPATQ8N5A5 531 aaKnown RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
GABRB3-225ENST00000638099 CHMP5Q9NZZ3 219 aa9.63□□□□□ -0.87
GABRB3-225ENST00000638099 TFCP2Q12800 502 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 PKP1Q13835 747 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 CHAMP1Q96JM3 812 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 ATG3Q9NT62 314 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 CPA1P15085 419 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 GPTP24298 496 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 RABEP1Q15276 862 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
GABRB3-225ENST00000638099 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
GABRB3-225ENST00000638099 ARFGEF2Q9Y6D5 1785 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms