RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	ZNF790	Q6PG37	636 aa		12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	MKRN1	Q9UHC7	482 aa	Known RBP	12.61	□□□□□ -0.39
CACNA1A-256	ENST00000637981	POTEI	P0CG38	1075 aa		12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	POTEJ	P0CG39	1038 aa		12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	IL6ST	P40189	918 aa	Predicted RBP	12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	NPM2	Q86SE8	214 aa	Known RBP	12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CNBD1	Q8NA66	436 aa		12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CNKSR1	Q969H4	720 aa		12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CFAP53	Q96M91	514 aa		12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	SETDB2	Q96T68	719 aa		12.6	□□□□□ -0.39
CACNA1A-256	ENST00000637981	ST5	P78524	1137 aa		12.59	□□□□□ -0.39
CACNA1A-256	ENST00000637981	SOGA3	Q5TF21	947 aa		12.59	□□□□□ -0.39
CACNA1A-256	ENST00000637981	STYK1	Q6J9G0	422 aa		12.59	□□□□□ -0.39
CACNA1A-256	ENST00000637981	PRPF40B	Q6NWY9	871 aa	Known RBP	12.59	□□□□□ -0.39
CACNA1A-256	ENST00000637981	IL17RE	Q8NFR9	667 aa		12.59	□□□□□ -0.39
CACNA1A-256	ENST00000637981	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.59	□□□□□ -0.39
CACNA1A-256	ENST00000637981	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.58	□□□□□ -0.39
CACNA1A-256	ENST00000637981	CACNA1S	Q13698	1873 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	SLX4	Q8IY92	1834 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	GNAT3	A8MTJ3	354 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	CAMTA2	O94983	1202 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	A1BG	P04217	495 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	SRGN	P10124	158 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	PPP2R1A	P30153	589 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	GAS2L2	Q8NHY3	880 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	MASTL	Q96GX5	879 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	FMNL2	Q96PY5	1086 aa		12.58	□□□□□ -0.4
CACNA1A-256	ENST00000637981	IQCA1L	A6NCM1	817 aa		12.57	□□□□□ -0.4
CACNA1A-256	ENST00000637981	U2SURP	O15042	1029 aa	Known RBP	12.57	□□□□□ -0.4
CACNA1A-256	ENST00000637981	DZIP3	Q86Y13	1208 aa	Known RBP	12.57	□□□□□ -0.4
CACNA1A-256	ENST00000637981	CNTNAP1	P78357	1384 aa		12.56	□□□□□ -0.4
CACNA1A-256	ENST00000637981	ARFGEF2	Q9Y6D5	1785 aa		12.56	□□□□□ -0.4
CACNA1A-256	ENST00000637981	FOXN1	O15353	648 aa		12.56	□□□□□ -0.4
CACNA1A-256	ENST00000637981	DIEXF	Q68CQ4	756 aa	Known RBP	12.56	□□□□□ -0.4
CACNA1A-256	ENST00000637981	LDHD	Q86WU2	507 aa		12.56	□□□□□ -0.4
CACNA1A-256	ENST00000637981	BCOR	Q6W2J9	1755 aa		12.55	□□□□□ -0.4
CACNA1A-256	ENST00000637981	BTBD11	A6QL63	1104 aa		12.55	□□□□□ -0.4
CACNA1A-256	ENST00000637981	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.55	□□□□□ -0.4
CACNA1A-256	ENST00000637981	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.55	□□□□□ -0.4
CACNA1A-256	ENST00000637981	NUDC	Q9Y266	331 aa		12.55	□□□□□ -0.4
CACNA1A-256	ENST00000637981	PASK	Q96RG2	1323 aa		12.55	□□□□□ -0.4
CACNA1A-256	ENST00000637981	KCNQ3	O43525	872 aa		12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	PIP4K2A	P48426	406 aa	Predicted RBP	12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	CCDC93	Q567U6	631 aa		12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	EAPP	Q56P03	285 aa	Predicted RBP	12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	SCN4A	P35499	1836 aa		12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	CEMIP	Q8WUJ3	1361 aa		12.54	□□□□□ -0.4
CACNA1A-256	ENST00000637981	TMEM88B	A6NKF7	163 aa		12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	CLEC4G	Q6UXB4	293 aa		12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	C7orf43	Q8WVR3	580 aa		12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	AIDA	Q96BJ3	306 aa		12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	PRDM10	Q9NQV6	1147 aa		12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	USP16	Q9Y5T5	823 aa		12.53	□□□□□ -0.4
CACNA1A-256	ENST00000637981	NPR1	P16066	1061 aa		12.52	□□□□□ -0.41
CACNA1A-256	ENST00000637981	VEGFB	P49765	207 aa		12.52	□□□□□ -0.41
CACNA1A-256	ENST00000637981	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.52	□□□□□ -0.41
CACNA1A-256	ENST00000637981	CLEC11A	Q9Y240	323 aa		12.52	□□□□□ -0.41
CACNA1A-256	ENST00000637981	ZNF652	Q9Y2D9	606 aa		12.52	□□□□□ -0.41
CACNA1A-256	ENST00000637981	ZNF541	Q9H0D2	1346 aa		12.52	□□□□□ -0.41
CACNA1A-256	ENST00000637981	PRAMEF22	A3QJZ6	481 aa		12.51	□□□□□ -0.41
CACNA1A-256	ENST00000637981	ITGBL1	O95965	494 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1A-256	ENST00000637981	CTCF	P49711	727 aa	Predicted RBP	12.51	□□□□□ -0.41
CACNA1A-256	ENST00000637981	POTEH	Q6S545	545 aa		12.51	□□□□□ -0.41
CACNA1A-256	ENST00000637981	PHACTR3	Q96KR7	559 aa		12.51	□□□□□ -0.41
CACNA1A-256	ENST00000637981	HACL1	Q9UJ83	578 aa		12.51	□□□□□ -0.41
CACNA1A-256	ENST00000637981	DLG5	Q8TDM6	1919 aa		12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	PRKAR2B	P31323	418 aa		12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	EPHX2	P34913	555 aa		12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	NCBP3	Q53F19	620 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	OLFM4	Q6UX06	510 aa		12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	TPTE2	Q6XPS3	522 aa		12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	RTKN2	Q8IZC4	609 aa		12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CACNA1A-256	ENST00000637981	RNF123	Q5XPI4	1314 aa		12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	KLRG2	A4D1S0	409 aa	Predicted RBP	12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	FAM177B	A6PVY3	158 aa		12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	SNRPA1	P09661	255 aa	Known RBP	12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	PNMA8A	Q86V59	439 aa	Predicted RBP	12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	RSPH6A	Q9H0K4	717 aa		12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	WBP1L	Q9NX94	342 aa		12.49	□□□□□ -0.41
CACNA1A-256	ENST00000637981	ADAMTSL1	Q8N6G6	1762 aa		12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	FZD9	O00144	591 aa		12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	IARS	P41252	1262 aa	Known RBP	12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	LBX1	P52954	281 aa		12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	CNTROB	Q8N137	903 aa		12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	SYNE4	Q8N205	404 aa		12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	RTF1	Q92541	710 aa	Known RBP	12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	PNN	Q9H307	717 aa	Known RBP	12.48	□□□□□ -0.41
CACNA1A-256	ENST00000637981	RASSF10	A6NK89	507 aa		12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	NBPF26	B4DH59	902 aa		12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	GTF2E1	P29083	439 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	ALDH1B1	P30837	517 aa		12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	DEFB115	Q30KQ5	88 aa		12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	MAP1S	Q66K74	1059 aa	Predicted RBP	12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	NBPF10	Q6P3W6	841 aa	Known RBP	12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	MCM10	Q7L590	875 aa		12.47	□□□□□ -0.41
CACNA1A-256	ENST00000637981	NBPF15	Q8N660	670 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms