RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 USP21Q9UK80 565 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 USP3Q9Y6I4 520 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 NDUFB9Q9Y6M9 179 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 A0A0A0MRY4 1105 aa3.98□□□□□ -1.77
SCN1A-215ENST00000637285 GPR37L1O60883 481 aa3.98□□□□□ -1.77
SCN1A-215ENST00000637285 ADH7P40394 386 aa3.98□□□□□ -1.77
SCN1A-215ENST00000637285 TXKP42681 527 aa3.98□□□□□ -1.77
SCN1A-215ENST00000637285 RAC1P63000 192 aa3.98□□□□□ -1.77
SCN1A-215ENST00000637285 NRG1Q02297 640 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-215ENST00000637285 SFSWAPQ12872 951 aaKnown RBP3.98□□□□□ -1.77
SCN1A-215ENST00000637285 RAB44Q7Z6P3 723 aaPredicted RBP3.98□□□□□ -1.77
SCN1A-215ENST00000637285 NEUROD4Q9HD90 331 aa3.98□□□□□ -1.77
SCN1A-215ENST00000637285 CDK2AP1O14519 115 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 LILRB5O75023 590 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 TXLNAP40222 546 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 TBC1D8BQ0IIM8 1120 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 ZNF295-AS1Q8N0V1 137 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 PHTF2Q8N3S3 785 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 TNFRSF25Q93038 417 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 LENG1Q96BZ8 264 aaPredicted RBP3.97□□□□□ -1.77
SCN1A-215ENST00000637285 PCMTD2Q9NV79 361 aa3.97□□□□□ -1.77
SCN1A-215ENST00000637285 A6NJY4 79 aa3.96□□□□□ -1.78
SCN1A-215ENST00000637285 YBX3P16989 372 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCN1A-215ENST00000637285 SPEM2Q0P670 501 aa3.96□□□□□ -1.78
SCN1A-215ENST00000637285 NEUROD1Q13562 356 aa3.96□□□□□ -1.78
SCN1A-215ENST00000637285 C20orf204Q6ZNR8 217 aa3.96□□□□□ -1.78
SCN1A-215ENST00000637285 IGFLR1Q9H665 355 aa3.96□□□□□ -1.78
SCN1A-215ENST00000637285 RNF112Q9ULX5 631 aa3.96□□□□□ -1.78
SCN1A-215ENST00000637285 IQSEC3Q9UPP2 1182 aaPredicted RBP3.96□□□□□ -1.78
SCN1A-215ENST00000637285 COL17A1Q9UMD9 1497 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-215ENST00000637285 EIF4G2P78344 907 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN1A-215ENST00000637285 MTMR14Q8NCE2 650 aa3.95□□□□□ -1.78
SCN1A-215ENST00000637285 NUDT8Q8WV74 236 aa3.95□□□□□ -1.78
SCN1A-215ENST00000637285 SLC4A9Q96Q91 983 aa3.95□□□□□ -1.78
SCN1A-215ENST00000637285 JPH1Q9HDC5 661 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-215ENST00000637285 TMEM229AB2RXF0 380 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 SSTR4P31391 388 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 MTFR1Q15390 333 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 ZDHHC1Q8WTX9 485 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 L3MBTL2Q969R5 705 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 SSBP4Q9BWG4 385 aaPredicted RBP3.94□□□□□ -1.78
SCN1A-215ENST00000637285 KRTAP4-7Q9BYR0 210 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 GOPCQ9HD26 462 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 SNRKQ9NRH2 765 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 ZNF232Q9UNY5 417 aa3.94□□□□□ -1.78
SCN1A-215ENST00000637285 APBB1O00213 710 aa3.93□□□□□ -1.78
SCN1A-215ENST00000637285 IREB2P48200 963 aaKnown RBP3.93□□□□□ -1.78
SCN1A-215ENST00000637285 IRAK1P51617 712 aa3.93□□□□□ -1.78
SCN1A-215ENST00000637285 DMRTC2Q8IXT2 367 aaPredicted RBP3.93□□□□□ -1.78
SCN1A-215ENST00000637285 WFDC12Q8WWY7 111 aa3.93□□□□□ -1.78
SCN1A-215ENST00000637285 BHMTQ93088 406 aa3.93□□□□□ -1.78
SCN1A-215ENST00000637285 UBE2OQ9C0C9 1292 aaKnown RBP3.93□□□□□ -1.78
SCN1A-215ENST00000637285 TBCELQ5QJ74 424 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 FMR1NBQ8N0W7 255 aaPredicted RBP3.92□□□□□ -1.78
SCN1A-215ENST00000637285 PLPP7Q8NBV4 271 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 BANK1Q8NDB2 785 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 RHPN1Q8TCX5 695 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 CEP63Q96MT8 703 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 FMNL2Q96PY5 1086 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 BRD7Q9NPI1 651 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 SCHIP1Q9P0W5 487 aaPredicted RBP3.92□□□□□ -1.78
SCN1A-215ENST00000637285 CHIC2Q9UKJ5 165 aa3.92□□□□□ -1.78
SCN1A-215ENST00000637285 SFI1A8K8P3 1242 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 EML1O00423 815 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 BACH1O14867 736 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 TAL1P17542 331 aaPredicted RBP3.91□□□□□ -1.78
SCN1A-215ENST00000637285 NOS2P35228 1153 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 MAP7D1Q3KQU3 841 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 PSAPL1Q6NUJ1 521 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 IL27Q8NEV9 243 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 SLC6A14Q9UN76 642 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 TBC1D2BQ9UPU7 963 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 KCNH4Q9UQ05 1017 aa3.91□□□□□ -1.78
SCN1A-215ENST00000637285 NOS3P29474 1203 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 AFF1P51825 1210 aaKnown RBP3.9□□□□□ -1.79
SCN1A-215ENST00000637285 PSME1Q06323 249 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 VAC14Q08AM6 782 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 FZD5Q13467 585 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 TEAD4Q15561 434 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 SH3PXD2AQ5TCZ1 1133 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.9□□□□□ -1.79
SCN1A-215ENST00000637285 HSH2DQ96JZ2 352 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 RNF114Q9Y508 228 aa3.9□□□□□ -1.79
SCN1A-215ENST00000637285 SERTM1A2A2V5 107 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 SOCS7O14512 581 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 RGS9O75916 674 aaPredicted RBP3.89□□□□□ -1.79
SCN1A-215ENST00000637285 FSTP19883 344 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 PRR23CQ6ZRP0 262 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 SLC9A9Q8IVB4 645 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 C7orf43Q8WVR3 580 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 MEGF10Q96KG7 1140 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 ZNF358Q9NW07 568 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 DNAJB12Q9NXW2 375 aaKnown RBP3.89□□□□□ -1.79
SCN1A-215ENST00000637285 PCDHGA11Q9Y5H2 935 aa3.89□□□□□ -1.79
SCN1A-215ENST00000637285 GPC6Q9Y625 555 aaPredicted RBP3.89□□□□□ -1.79
SCN1A-215ENST00000637285 KCNQ4P56696 695 aa3.88□□□□□ -1.79
SCN1A-215ENST00000637285 IRF5Q13568 498 aa3.88□□□□□ -1.79
SCN1A-215ENST00000637285 FBXO11Q86XK2 927 aa3.88□□□□□ -1.79
SCN1A-215ENST00000637285 TNS4Q8IZW8 715 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms