RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 TMEM94Q12767 1356 aa18.52■□□□□ 0.56
CACNA1A-235ENST00000637004 RAB11FIP3O75154 756 aa18.52■□□□□ 0.56
CACNA1A-235ENST00000637004 LSG1Q9H089 658 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-235ENST00000637004 NUP62CLQ9H1M0 184 aa18.52■□□□□ 0.56
CACNA1A-235ENST00000637004 CTNNA3Q9UI47 895 aa18.52■□□□□ 0.56
CACNA1A-235ENST00000637004 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-235ENST00000637004 CCDC186Q7Z3E2 898 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 DRC7Q8IY82 874 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 TYRO3Q06418 890 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 FLIIQ13045 1269 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 CCDC112Q8NEF3 446 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 HYPKQ9NX55 129 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
CACNA1A-235ENST00000637004 TNNT1P13805 278 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 KRT85P78386 507 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 PAXIP1Q6ZW49 1069 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 C16orf45Q96MC5 204 aaPredicted RBP18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 CCDC61Q9Y6R9 512 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 CASTP20810 708 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 IL1RAPL2Q9NP60 686 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 DDX41Q9UJV9 622 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 MRVI1Q9Y6F6 885 aa18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-235ENST00000637004 CPS1P31327 1500 aa18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 ELP1O95163 1332 aa18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 NUTM1Q86Y26 1132 aa18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 SSH3Q8TE77 659 aa18.49■□□□□ 0.55
CACNA1A-235ENST00000637004 PI4K2BQ8TCG2 481 aa18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 PDRG1Q9NUG6 133 aa18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 PIP4K2BP78356 416 aa18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 TRIM5Q9C035 493 aa18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 TNMDQ9H2S6 317 aa18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 CCDC171Q6TFL3 1326 aa18.48■□□□□ 0.55
CACNA1A-235ENST00000637004 IGSF3O75054 1194 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 ZSCAN25Q6NSZ9 544 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 TM6SF1Q9BZW5 370 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 MORC2Q9Y6X9 1032 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 STRCP1A6NGW2 1772 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 LARGE1O95461 756 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 MAP4K4O95819 1239 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 CYP46A1Q9Y6A2 500 aa18.47■□□□□ 0.55
CACNA1A-235ENST00000637004 ZNF75DP51815 510 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 CBX8Q9HC52 389 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 GOLGA6L4A6NEF3 574 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 PDCP20941 246 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 LRMPQ12912 555 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 TTC6Q86TZ1 520 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 PLA2G4DQ86XP0 818 aa18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 DDX19AQ9NUU7 478 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-235ENST00000637004 TPD52L1Q16890 204 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 ANO6Q4KMQ2 910 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 CWC27Q6UX04 472 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 RHPN1Q8TCX5 695 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 KIF1BPQ96EK5 621 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 CAMK4Q16566 473 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 SCAND2PQ9GZW5 306 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 USP44Q9H0E7 712 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 TDRD7Q8NHU6 1098 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 ZSWIM6Q9HCJ5 1215 aa18.45■□□□□ 0.54
CACNA1A-235ENST00000637004 CAVIN2O95810 425 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 LIG1P18858 919 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 SPG7Q9UQ90 795 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 MON2Q7Z3U7 1717 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 CPA1P15085 419 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 KIF18AQ8NI77 898 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
CACNA1A-235ENST00000637004 DACT1Q9NYF0 836 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 NPHP3Q7Z494 1330 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 CEP135Q66GS9 1140 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 RBM43Q6ZSC3 357 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 KRT222Q8N1A0 295 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 CLIP2Q9UDT6 1046 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 NRBP1Q9UHY1 535 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
CACNA1A-235ENST00000637004 SETD1AO15047 1707 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 NEMFO60524 1076 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 POLA2Q14181 598 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 CKAP2LQ8IYA6 745 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 DDX17Q92841 729 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
CACNA1A-235ENST00000637004 CCDC66A2RUB6 948 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms