RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	MEX3C	Q5U5Q3	659 aa	Known RBP	4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	TRIM67	Q6ZTA4	783 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	ZSCAN1	Q8NBB4	408 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	SLC12A5	Q9H2X9	1139 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	AFF2	P51816	1311 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	RGPD1	P0DJD0	1748 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	PHF14	O94880	888 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	MFAP1	P55081	439 aa	Known RBP	4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	IRF5	Q13568	498 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	IP6K1	Q92551	441 aa		4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	REPIN1	Q9BWE0	567 aa	Known RBP	4.87	□□□□□ -1.63
LGI1-222	ENST00000636754	PKD1L3	Q7Z443	1732 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	KIAA0232	Q92628	1395 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	FYB1	O15117	783 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	PER1	O15534	1290 aa	Predicted RBP	4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	TMC1	Q8TDI8	760 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	MTR	Q99707	1265 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	KNSTRN	Q9Y448	316 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	SPATA31A5	Q5VU36	1347 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	SPATA31A7	Q8IWB4	1347 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	WDR17	Q8IZU2	1322 aa		4.86	□□□□□ -1.63
LGI1-222	ENST00000636754	FAM187A	A6NFU0	413 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	CCDC125	Q86Z20	511 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	CARD10	Q9BWT7	1032 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	KRTAP9-2	Q9BYQ4	174 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	PRDM11	Q9NQV5	511 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	LRRC37A3	O60309	1634 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	TNS2	Q63HR2	1409 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	PEAK1	Q9H792	1746 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	TERT	O14746	1132 aa	Known RBP	4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	RBM25	P49756	843 aa	Known RBP	4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	KCNMA1	Q12791	1236 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	HIC1	Q14526	733 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	SH3D19	Q5HYK7	790 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	CARD14	Q9BXL6	1004 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	USP21	Q9UK80	565 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	SPATA31A1	Q5TZJ5	1347 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	PARD3	Q8TEW0	1356 aa		4.85	□□□□□ -1.63
LGI1-222	ENST00000636754	CIC	Q96RK0	1608 aa	Predicted RBP	4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	RXRB	P28702	533 aa		4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	RALBP1	Q15311	655 aa		4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	C6orf132	Q5T0Z8	1188 aa		4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	DDX17	Q92841	729 aa	Known RBP	4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	GJD4	Q96KN9	370 aa	Predicted RBP	4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	PANK3	Q9H999	370 aa		4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	OVOS2	A0A0G2JMS6	1433 aa		4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	RGS12	O14924	1447 aa		4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	COL3A1	P02461	1466 aa	Predicted RBP	4.84	□□□□□ -1.63
LGI1-222	ENST00000636754	ZNF831	Q5JPB2	1677 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	FAM83G	A6ND36	823 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	OSBP	P22059	807 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	PACS2	Q86VP3	889 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	NME9	Q86XW9	330 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	KRTAP1-3	Q8IUG1	177 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	RGS17	Q9UGC6	210 aa	Predicted RBP	4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	KDR	P35968	1356 aa		4.84	□□□□□ -1.64
LGI1-222	ENST00000636754	MAP2	P11137	1827 aa	Known RBP	4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	KRTAP9-6	A0A140TA67	174 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	FCHSD2	O94868	740 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	TCP11L2	Q8N4U5	519 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	C8orf37	Q96NL8	207 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	PSMG3-AS1	Q96PY0	264 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	NHS	Q6T4R5	1651 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	ADAMTS7	Q9UKP4	1686 aa		4.83	□□□□□ -1.64
LGI1-222	ENST00000636754	HOXC9	P31274	260 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	XPC	Q01831	940 aa	Predicted RBP	4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	EPAS1	Q99814	870 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	QTRT2	Q9H974	415 aa	Known RBP	4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	COG6	Q9Y2V7	657 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	MAP3K19	Q56UN5	1328 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	RGPD5	Q99666	1765 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	IGSF1	Q8N6C5	1336 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	SKIV2L	Q15477	1246 aa	Known RBP	4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	ZNF598	Q86UK7	904 aa	Known RBP	4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	BTG4	Q9NY30	223 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	SHANK3	Q9BYB0	1731 aa		4.82	□□□□□ -1.64
LGI1-222	ENST00000636754	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	NUTM2E	B1AL46	878 aa	Predicted RBP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	MORC1	Q86VD1	984 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	SLC16A10	Q8TF71	515 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	ZNF516	Q92618	1163 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	TNS1	Q9HBL0	1735 aa	Known RBP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	ADAMTS2	O95450	1211 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	POTEA	Q6S8J7	498 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	SAMD7	Q7Z3H4	446 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	CFAP53	Q96M91	514 aa		4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	PNN	Q9H307	717 aa	Known RBP	4.81	□□□□□ -1.64
LGI1-222	ENST00000636754	MRC1	P22897	1456 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	BRWD3	Q6RI45	1802 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	QSER1	Q2KHR3	1735 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	RREB1	Q92766	1687 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	AMPH	P49418	695 aa		4.8	□□□□□ -1.64
LGI1-222	ENST00000636754	EVA1C	P58658	441 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms