RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 RHPN1Q8TCX5 695 aa7.74□□□□□ -1.17
CHD2-219ENST00000630016 CHMP3Q9Y3E7 222 aa7.74□□□□□ -1.17
CHD2-219ENST00000630016 SERTM1A2A2V5 107 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 RAD21O60216 631 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 SIN3BO75182 1162 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 GATA4P43694 442 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 ATP1A2P50993 1020 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 EPHA4P54764 986 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 NEUROD1Q13562 356 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 DEPDC4Q8N2C3 294 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 Q8N3U1 123 aa7.73□□□□□ -1.17
CHD2-219ENST00000630016 DOC2BQ14184 412 aa7.72□□□□□ -1.17
CHD2-219ENST00000630016 TBCELQ5QJ74 424 aa7.72□□□□□ -1.17
CHD2-219ENST00000630016 TNS4Q8IZW8 715 aa7.72□□□□□ -1.17
CHD2-219ENST00000630016 ADARB2-AS1A8MUL3 147 aa7.71□□□□□ -1.18
CHD2-219ENST00000630016 APBA3O96018 575 aa7.71□□□□□ -1.18
CHD2-219ENST00000630016 PSMA6P60900 246 aaKnown RBP7.71□□□□□ -1.18
CHD2-219ENST00000630016 TPCN2Q8NHX9 752 aa7.71□□□□□ -1.18
CHD2-219ENST00000630016 TNFRSF25Q93038 417 aa7.71□□□□□ -1.18
CHD2-219ENST00000630016 MDFIQ99750 246 aa7.7□□□□□ -1.18
CHD2-219ENST00000630016 USP17L3A6NCW0 530 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 USP17L4A6NCW7 530 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 M0R082 166 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 SFSWAPQ12872 951 aaKnown RBP7.69□□□□□ -1.18
CHD2-219ENST00000630016 SH3PXD2AQ5TCZ1 1133 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 CCDC102BQ68D86 513 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 USP17L2Q6R6M4 530 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 USP17L1Q7RTZ2 530 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 ZNF417Q8TAU3 575 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 ZNF587Q96SQ5 575 aaPredicted RBP7.69□□□□□ -1.18
CHD2-219ENST00000630016 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 BRD7Q9NPI1 651 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 ANKIB1Q9P2G1 1089 aa7.69□□□□□ -1.18
CHD2-219ENST00000630016 SPEM2Q0P670 501 aa7.68□□□□□ -1.18
CHD2-219ENST00000630016 C1orf53Q5VUE5 145 aa7.68□□□□□ -1.18
CHD2-219ENST00000630016 POM121Q96HA1 1249 aa7.68□□□□□ -1.18
CHD2-219ENST00000630016 CEP63Q96MT8 703 aa7.68□□□□□ -1.18
CHD2-219ENST00000630016 NACC1Q96RE7 527 aa7.68□□□□□ -1.18
CHD2-219ENST00000630016 SLC30A3Q99726 388 aa7.68□□□□□ -1.18
CHD2-219ENST00000630016 UBTFP17480 764 aaKnown RBP7.67□□□□□ -1.18
CHD2-219ENST00000630016 ADH7P40394 386 aa7.67□□□□□ -1.18
CHD2-219ENST00000630016 HIRAP54198 1017 aaPredicted RBP7.67□□□□□ -1.18
CHD2-219ENST00000630016 HSH2DQ96JZ2 352 aa7.67□□□□□ -1.18
CHD2-219ENST00000630016 PHACTR1Q9C0D0 580 aa7.67□□□□□ -1.18
CHD2-219ENST00000630016 TSPAN10Q9H1Z9 355 aaPredicted RBP7.67□□□□□ -1.18
CHD2-219ENST00000630016 PRDM6Q9NQX0 595 aa7.67□□□□□ -1.18
CHD2-219ENST00000630016 KIAA1024Q9UPX6 916 aa7.67□□□□□ -1.18
CHD2-219ENST00000630016 RBM19Q9Y4C8 960 aaKnown RBP7.67□□□□□ -1.18
CHD2-219ENST00000630016 M0R2N6 131 aa7.66□□□□□ -1.18
CHD2-219ENST00000630016 ALBP02768 609 aa7.66□□□□□ -1.18
CHD2-219ENST00000630016 CLDN10P78369 228 aa7.66□□□□□ -1.18
CHD2-219ENST00000630016 RAB44Q7Z6P3 723 aaPredicted RBP7.66□□□□□ -1.18
CHD2-219ENST00000630016 C7orf43Q8WVR3 580 aa7.66□□□□□ -1.18
CHD2-219ENST00000630016 PALM3A6NDB9 673 aaPredicted RBP7.65□□□□□ -1.18
CHD2-219ENST00000630016 ATP9BO43861 1147 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 TYRO3Q06418 890 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
CHD2-219ENST00000630016 HIF1AQ16665 826 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 MICALL1Q8N3F8 863 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 LARGE2Q8N3Y3 721 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 OGFOD1Q8N543 542 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 KCNH4Q9UQ05 1017 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 HCN4Q9Y3Q4 1203 aa7.65□□□□□ -1.18
CHD2-219ENST00000630016 POM121CA8CG34 1229 aa7.64□□□□□ -1.19
CHD2-219ENST00000630016 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
CHD2-219ENST00000630016 KCNQ4P56696 695 aa7.64□□□□□ -1.19
CHD2-219ENST00000630016 FLIIQ13045 1269 aa7.64□□□□□ -1.19
CHD2-219ENST00000630016 ZMYM1Q5SVZ6 1142 aa7.64□□□□□ -1.19
CHD2-219ENST00000630016 POTEAQ6S8J7 498 aa7.64□□□□□ -1.19
CHD2-219ENST00000630016 STARD13Q9Y3M8 1113 aa7.64□□□□□ -1.19
CHD2-219ENST00000630016 SFI1A8K8P3 1242 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 PPP1R12BO60237 982 aaPredicted RBP7.63□□□□□ -1.19
CHD2-219ENST00000630016 ITGB7P26010 798 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 RSPO4Q2I0M5 234 aaPredicted RBP7.63□□□□□ -1.19
CHD2-219ENST00000630016 SIX5Q8N196 739 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 ADAMTS19Q8TE59 1207 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 UCN2Q96RP3 112 aa7.63□□□□□ -1.19
CHD2-219ENST00000630016 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
CHD2-219ENST00000630016 NID1P14543 1247 aa7.62□□□□□ -1.19
CHD2-219ENST00000630016 COL9A3Q14050 684 aaPredicted RBP7.62□□□□□ -1.19
CHD2-219ENST00000630016 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
CHD2-219ENST00000630016 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
CHD2-219ENST00000630016 BHMTQ93088 406 aa7.62□□□□□ -1.19
CHD2-219ENST00000630016 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
CHD2-219ENST00000630016 UBE2OQ9C0C9 1292 aaKnown RBP7.62□□□□□ -1.19
CHD2-219ENST00000630016 TPSG1Q9NRR2 321 aa7.62□□□□□ -1.19
CHD2-219ENST00000630016 LILRB5O75023 590 aa7.61□□□□□ -1.19
CHD2-219ENST00000630016 TBC1D8BQ0IIM8 1120 aa7.61□□□□□ -1.19
CHD2-219ENST00000630016 TSEN2Q8NCE0 465 aaKnown RBP7.61□□□□□ -1.19
CHD2-219ENST00000630016 ZNF280CQ8ND82 737 aa7.61□□□□□ -1.19
CHD2-219ENST00000630016 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
CHD2-219ENST00000630016 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
CHD2-219ENST00000630016 TRAPPC3LQ5T215 181 aa7.6□□□□□ -1.19
CHD2-219ENST00000630016 ALDH16A1Q8IZ83 802 aa7.6□□□□□ -1.19
CHD2-219ENST00000630016 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
CHD2-219ENST00000630016 EFCC1Q9HA90 598 aa7.6□□□□□ -1.19
CHD2-219ENST00000630016 C9orf172C9J069 976 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms