RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CWC25Q9NXE8 425 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-207ENST00000628646 GNAI2P04899 355 aa15.41■□□□□ 0.06
SYNGAP1-207ENST00000628646 DEKP35659 375 aaKnown RBP15.41■□□□□ 0.06
SYNGAP1-207ENST00000628646 SOS1Q07889 1333 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-207ENST00000628646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 PPP1R42Q7Z4L9 355 aa15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 FRAT2O75474 233 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
SYNGAP1-207ENST00000628646 SLC4A3P48751 1232 aa15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 CWF19L2Q2TBE0 894 aaKnown RBP15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 POLD1P28340 1107 aa15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 KCNJ4P48050 445 aa15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 G3BP1Q13283 466 aaKnown RBP eCLIP15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 PTF1AQ7RTS3 328 aa15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 ZBTB40Q9NUA8 1239 aa15.39■□□□□ 0.05
SYNGAP1-207ENST00000628646 EZH2Q15910 746 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-207ENST00000628646 PARP3Q9Y6F1 533 aa15.38■□□□□ 0.05
SYNGAP1-207ENST00000628646 SMIM5Q71RC9 77 aa15.38■□□□□ 0.05
SYNGAP1-207ENST00000628646 CCDC57Q2TAC2 916 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 BECN1Q14457 450 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 SIL1Q9H173 461 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 FLAD1Q8NFF5 587 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 PLBD2Q8NHP8 589 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 IL6STP40189 918 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 CNNM1Q9NRU3 951 aa15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 PHRF1Q9P1Y6 1649 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-207ENST00000628646 TPTE2Q6XPS3 522 aa15.36■□□□□ 0.05
SYNGAP1-207ENST00000628646 MPHOSPH8Q99549 860 aa15.36■□□□□ 0.05
SYNGAP1-207ENST00000628646 KDM6AO15550 1401 aaPredicted RBP15.36■□□□□ 0.05
SYNGAP1-207ENST00000628646 SURF6O75683 361 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-207ENST00000628646 USP54Q70EL1 1684 aa15.36■□□□□ 0.05
SYNGAP1-207ENST00000628646 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 ST5P78524 1137 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 LINS1Q8NG48 757 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 CEMIPQ8WUJ3 1361 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 ANKRD45Q5TZF3 282 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 SMC5Q8IY18 1101 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 UTP14AQ9BVJ6 771 aaKnown RBP15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 ATRNO75882 1429 aa15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 CYP19A1P11511 503 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-207ENST00000628646 ZNF622Q969S3 477 aaKnown RBP eCLIP15.35■□□□□ 0.051e-6■■■■□ 21.4
SYNGAP1-207ENST00000628646 PSDA5PKW4 1024 aaPredicted RBP15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 RPGRQ92834 1020 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 SRP68Q9UHB9 627 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 ERBB4Q15303 1308 aa15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 ITPK1Q13572 414 aa15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 LRRFIP2Q9Y608 721 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 ARHGAP45Q92619 1136 aa15.34■□□□□ 0.05
SYNGAP1-207ENST00000628646 RPS6KA4O75676 772 aa15.33■□□□□ 0.05
SYNGAP1-207ENST00000628646 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
SYNGAP1-207ENST00000628646 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
SYNGAP1-207ENST00000628646 NEUROD6Q96NK8 337 aa15.33■□□□□ 0.04
SYNGAP1-207ENST00000628646 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
SYNGAP1-207ENST00000628646 METTL22Q9BUU2 404 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-207ENST00000628646 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
SYNGAP1-207ENST00000628646 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
SYNGAP1-207ENST00000628646 MEIS3Q99687 375 aa15.32■□□□□ 0.04
SYNGAP1-207ENST00000628646 GRM8O00222 908 aa15.32■□□□□ 0.04
SYNGAP1-207ENST00000628646 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
SYNGAP1-207ENST00000628646 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
SYNGAP1-207ENST00000628646 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 IGHMBP2P38935 993 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 R3HDM1Q15032 1099 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 RGS12O14924 1447 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 ALDH1L1O75891 902 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 IFIT5Q13325 482 aaKnown RBP15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 MAP3K15Q6ZN16 1313 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 HCLS1P14317 486 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 NLGN1Q8N2Q7 840 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 RGS17Q9UGC6 210 aaPredicted RBP15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 ABCC4O15439 1325 aa15.31■□□□□ 0.04
SYNGAP1-207ENST00000628646 RGPD5Q99666 1765 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 TCIRG1Q13488 830 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 TBC1D32Q96NH3 1257 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 PARP10Q53GL7 1025 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 HSP90AB4PQ58FF6 505 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 CCDC125Q86Z20 511 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 BCL9O00512 1426 aa15.3■□□□□ 0.04
SYNGAP1-207ENST00000628646 ARHGEF1Q92888 912 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 GPATCH3Q96I76 525 aa15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
SYNGAP1-207ENST00000628646 NBPF26B4DH59 902 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms