RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 PDE6BP35913 854 aa14.36□□□□□ -0.11
TCF4-253ENST00000626466 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
TCF4-253ENST00000626466 DPY19L2Q6NUT2 758 aa14.36□□□□□ -0.11
TCF4-253ENST00000626466 PRPF40BQ6NWY9 871 aaKnown RBP14.36□□□□□ -0.11
TCF4-253ENST00000626466 TAOK3Q9H2K8 898 aa14.36□□□□□ -0.11
TCF4-253ENST00000626466 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 PRAMEF22A3QJZ6 481 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 FOXN1O15353 648 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 SRGNP10124 158 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
TCF4-253ENST00000626466 OLFM4Q6UX06 510 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 CNBD1Q8NA66 436 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 CREBZFQ9NS37 354 aa14.35□□□□□ -0.11
TCF4-253ENST00000626466 DICER1Q9UPY3 1922 aaKnown RBP14.35□□□□□ -0.11
TCF4-253ENST00000626466 CACNA1SQ13698 1873 aa14.34□□□□□ -0.11
TCF4-253ENST00000626466 PER1O15534 1290 aaPredicted RBP14.34□□□□□ -0.11
TCF4-253ENST00000626466 IL6STP40189 918 aaPredicted RBP14.34□□□□□ -0.11
TCF4-253ENST00000626466 CNGB1Q14028 1251 aaPredicted RBP14.34□□□□□ -0.11
TCF4-253ENST00000626466 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
TCF4-253ENST00000626466 ZNF541Q9H0D2 1346 aa14.34□□□□□ -0.11
TCF4-253ENST00000626466 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
TCF4-253ENST00000626466 U2SURPO15042 1029 aaKnown RBP14.33□□□□□ -0.12
TCF4-253ENST00000626466 TEFQ10587 303 aa14.33□□□□□ -0.12
TCF4-253ENST00000626466 STYK1Q6J9G0 422 aa14.33□□□□□ -0.12
TCF4-253ENST00000626466 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
TCF4-253ENST00000626466 PASKQ96RG2 1323 aa14.33□□□□□ -0.12
TCF4-253ENST00000626466 CEMIPQ8WUJ3 1361 aa14.33□□□□□ -0.12
TCF4-253ENST00000626466 GNAT3A8MTJ3 354 aa14.32□□□□□ -0.12
TCF4-253ENST00000626466 DZIP3Q86Y13 1208 aaKnown RBP14.32□□□□□ -0.12
TCF4-253ENST00000626466 CNKSR1Q969H4 720 aa14.32□□□□□ -0.12
TCF4-253ENST00000626466 PHACTR3Q96KR7 559 aa14.32□□□□□ -0.12
TCF4-253ENST00000626466 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
TCF4-253ENST00000626466 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
TCF4-253ENST00000626466 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
TCF4-253ENST00000626466 SLC51AQ86UW1 340 aa14.31□□□□□ -0.12
TCF4-253ENST00000626466 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
TCF4-253ENST00000626466 TAF1DQ9H5J8 278 aaPredicted RBP14.31□□□□□ -0.12
TCF4-253ENST00000626466 ZNF277Q9NRM2 450 aaPredicted RBP14.31□□□□□ -0.12
TCF4-253ENST00000626466 NPHP1O15259 732 aa14.3□□□□□ -0.12
TCF4-253ENST00000626466 ST5P78524 1137 aa14.3□□□□□ -0.12
TCF4-253ENST00000626466 GAS2L2Q8NHY3 880 aa14.3□□□□□ -0.12
TCF4-253ENST00000626466 MASTLQ96GX5 879 aa14.3□□□□□ -0.12
TCF4-253ENST00000626466 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
TCF4-253ENST00000626466 PDZRN3Q9UPQ7 1066 aa14.3□□□□□ -0.12
TCF4-253ENST00000626466 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
TCF4-253ENST00000626466 VEGFBP49765 207 aa14.29□□□□□ -0.12
TCF4-253ENST00000626466 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
TCF4-253ENST00000626466 TEX13AQ9BXU3 409 aaPredicted RBP14.29□□□□□ -0.12
TCF4-253ENST00000626466 PCNTO95613 3336 aa14.29□□□□□ -0.12
TCF4-253ENST00000626466 ADAMTSL1Q8N6G6 1762 aa14.29□□□□□ -0.12
TCF4-253ENST00000626466 NBPF26B4DH59 902 aa14.28□□□□□ -0.12
TCF4-253ENST00000626466 COL4A5P29400 1685 aa14.28□□□□□ -0.12
TCF4-253ENST00000626466 CCDC93Q567U6 631 aa14.28□□□□□ -0.12
TCF4-253ENST00000626466 EAPPQ56P03 285 aaPredicted RBP14.28□□□□□ -0.12
TCF4-253ENST00000626466 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
TCF4-253ENST00000626466 NBPF5PQ86XG9 351 aaPredicted RBP14.28□□□□□ -0.12
TCF4-253ENST00000626466 NBPF15Q8N660 670 aa14.28□□□□□ -0.12
TCF4-253ENST00000626466 SNED1Q8TER0 1413 aa14.27□□□□□ -0.12
TCF4-253ENST00000626466 FAM177BA6PVY3 158 aa14.27□□□□□ -0.13
TCF4-253ENST00000626466 BTBD11A6QL63 1104 aa14.27□□□□□ -0.13
TCF4-253ENST00000626466 PRKAR2BP31323 418 aa14.27□□□□□ -0.13
TCF4-253ENST00000626466 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
TCF4-253ENST00000626466 ABCC12Q96J65 1359 aa14.26□□□□□ -0.13
TCF4-253ENST00000626466 RNF123Q5XPI4 1314 aa14.26□□□□□ -0.13
TCF4-253ENST00000626466 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
TCF4-253ENST00000626466 NPR1P16066 1061 aa14.26□□□□□ -0.13
TCF4-253ENST00000626466 FKBP4Q02790 459 aaKnown RBP eCLIP14.26□□□□□ -0.13
TCF4-253ENST00000626466 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
TCF4-253ENST00000626466 MCM10Q7L590 875 aa14.26□□□□□ -0.13
TCF4-253ENST00000626466 KLRG2A4D1S0 409 aaPredicted RBP14.25□□□□□ -0.13
TCF4-253ENST00000626466 TMEM88BA6NKF7 163 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 EPHX2P34913 555 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 FMR1Q06787 632 aaKnown RBP eCLIP14.25□□□□□ -0.13
TCF4-253ENST00000626466 DCTN1Q14203 1278 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 HLFQ16534 295 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 MAP1SQ66K74 1059 aaPredicted RBP14.25□□□□□ -0.13
TCF4-253ENST00000626466 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 HACL1Q9UJ83 578 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 SCN4AP35499 1836 aa14.25□□□□□ -0.13
TCF4-253ENST00000626466 LTBP1Q14766 1721 aa14.24□□□□□ -0.13
TCF4-253ENST00000626466 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
TCF4-253ENST00000626466 LBX1P52954 281 aa14.24□□□□□ -0.13
TCF4-253ENST00000626466 WBP1LQ9NX94 342 aa14.24□□□□□ -0.13
TCF4-253ENST00000626466 NIP7Q9Y221 180 aaKnown RBP eCLIP14.24□□□□□ -0.13
TCF4-253ENST00000626466 NPC1L1Q9UHC9 1359 aa14.23□□□□□ -0.13
TCF4-253ENST00000626466 CLEC4GQ6UXB4 293 aa14.23□□□□□ -0.13
TCF4-253ENST00000626466 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
TCF4-253ENST00000626466 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
TCF4-253ENST00000626466 FZD9O00144 591 aa14.22□□□□□ -0.13
TCF4-253ENST00000626466 SNRPA1P09661 255 aaKnown RBP14.22□□□□□ -0.13
TCF4-253ENST00000626466 HSPA8P11142 646 aaKnown RBP14.22□□□□□ -0.13
TCF4-253ENST00000626466 IARSP41252 1262 aaKnown RBP14.22□□□□□ -0.13
TCF4-253ENST00000626466 SYNE4Q8N205 404 aa14.22□□□□□ -0.13
TCF4-253ENST00000626466 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
TCF4-253ENST00000626466 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.13
TCF4-253ENST00000626466 CNTROBQ8N137 903 aa14.21□□□□□ -0.13
TCF4-253ENST00000626466 CCER1Q8TC90 406 aaPredicted RBP14.21□□□□□ -0.13
TCF4-253ENST00000626466 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
TCF4-253ENST00000626466 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
TCF4-253ENST00000626466 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms