RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
SNX12-206ENST00000622259 C7orf43Q8WVR3 580 aa20.16■□□□□ 0.82
SNX12-206ENST00000622259 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
SNX12-206ENST00000622259 AOC2O75106 756 aa20.15■□□□□ 0.82
SNX12-206ENST00000622259 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
SNX12-206ENST00000622259 ZNF277Q9NRM2 450 aaPredicted RBP20.15■□□□□ 0.82
SNX12-206ENST00000622259 ARFGEF2Q9Y6D5 1785 aa20.15■□□□□ 0.82
SNX12-206ENST00000622259 SRGNP10124 158 aa20.14■□□□□ 0.81
SNX12-206ENST00000622259 PNMA8AQ86V59 439 aaPredicted RBP20.14■□□□□ 0.81
SNX12-206ENST00000622259 LGR6Q9HBX8 967 aa20.14■□□□□ 0.81
SNX12-206ENST00000622259 STYK1Q6J9G0 422 aa20.13■□□□□ 0.81
SNX12-206ENST00000622259 OLFM4Q6UX06 510 aa20.13■□□□□ 0.81
SNX12-206ENST00000622259 SLC52A2Q9HAB3 445 aa20.13■□□□□ 0.81
SNX12-206ENST00000622259 ECE1P42892 770 aa20.12■□□□□ 0.81
SNX12-206ENST00000622259 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
SNX12-206ENST00000622259 CST9Q5W186 159 aa20.12■□□□□ 0.81
SNX12-206ENST00000622259 DGKZQ13574 1117 aa20.11■□□□□ 0.81
SNX12-206ENST00000622259 SOGA3Q5TF21 947 aa20.11■□□□□ 0.81
SNX12-206ENST00000622259 SCN7AQ01118 1682 aa20.1■□□□□ 0.81
SNX12-206ENST00000622259 MASTLQ96GX5 879 aa20.1■□□□□ 0.81
SNX12-206ENST00000622259 TRAF5O00463 557 aa20.09■□□□□ 0.81
SNX12-206ENST00000622259 FKBP4Q02790 459 aaKnown RBP eCLIP20.09■□□□□ 0.81
SNX12-206ENST00000622259 CCDC93Q567U6 631 aa20.09■□□□□ 0.81
SNX12-206ENST00000622259 MRC1P22897 1456 aa20.08■□□□□ 0.81
SNX12-206ENST00000622259 FZD9O00144 591 aa20.08■□□□□ 0.81
SNX12-206ENST00000622259 CNBD1Q8NA66 436 aa20.08■□□□□ 0.81
SNX12-206ENST00000622259 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.81
SNX12-206ENST00000622259 TLL2Q9Y6L7 1015 aa20.08■□□□□ 0.81
SNX12-206ENST00000622259 TRPM7Q96QT4 1865 aa20.07■□□□□ 0.8
SNX12-206ENST00000622259 MAP2K2P36507 400 aa20.07■□□□□ 0.8
SNX12-206ENST00000622259 SOX10P56693 466 aa20.07■□□□□ 0.8
SNX12-206ENST00000622259 SULT6B1Q6IMI4 303 aa20.06■□□□□ 0.8
SNX12-206ENST00000622259 A0A087WZG4 1122 aa20.05■□□□□ 0.8
SNX12-206ENST00000622259 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
SNX12-206ENST00000622259 CDCA8Q53HL2 280 aa20.05■□□□□ 0.8
SNX12-206ENST00000622259 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
SNX12-206ENST00000622259 PRPF38BQ5VTL8 546 aaKnown RBP20.05■□□□□ 0.8
SNX12-206ENST00000622259 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
SNX12-206ENST00000622259 GPC2Q8N158 579 aa20.05■□□□□ 0.8
SNX12-206ENST00000622259 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
SNX12-206ENST00000622259 COL4A5P29400 1685 aa20.03■□□□□ 0.8
SNX12-206ENST00000622259 UBR2Q8IWV8 1755 aa20.03■□□□□ 0.8
SNX12-206ENST00000622259 IARSP41252 1262 aaKnown RBP20.03■□□□□ 0.8
SNX12-206ENST00000622259 EPS15P42566 896 aa20.03■□□□□ 0.8
SNX12-206ENST00000622259 ST5P78524 1137 aa20.03■□□□□ 0.8
SNX12-206ENST00000622259 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
SNX12-206ENST00000622259 NPHP1O15259 732 aa20.02■□□□□ 0.8
SNX12-206ENST00000622259 CA12O43570 354 aa20.02■□□□□ 0.8
SNX12-206ENST00000622259 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
SNX12-206ENST00000622259 SYNE4Q8N205 404 aa20.02■□□□□ 0.8
SNX12-206ENST00000622259 GJA3Q9Y6H8 435 aa20.02■□□□□ 0.8
SNX12-206ENST00000622259 SCNN1DP51172 638 aa20.01■□□□□ 0.79
SNX12-206ENST00000622259 SAPCD2Q86UD0 394 aa20.01■□□□□ 0.79
SNX12-206ENST00000622259 STARD3NLO95772 234 aa20■□□□□ 0.79
SNX12-206ENST00000622259 BRPF1P55201 1214 aaPredicted RBP20■□□□□ 0.79
SNX12-206ENST00000622259 CIAPIN1Q6FI81 312 aa20■□□□□ 0.79
SNX12-206ENST00000622259 ZIC5Q96T25 663 aa20■□□□□ 0.79
SNX12-206ENST00000622259 NPR1P16066 1061 aa19.99■□□□□ 0.79
SNX12-206ENST00000622259 SNED1Q8TER0 1413 aa19.99■□□□□ 0.79
SNX12-206ENST00000622259 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
SNX12-206ENST00000622259 KLRG2A4D1S0 409 aaPredicted RBP19.97■□□□□ 0.79
SNX12-206ENST00000622259 LMOD1P29536 600 aaPredicted RBP19.97■□□□□ 0.79
SNX12-206ENST00000622259 BCORQ6W2J9 1755 aa19.97■□□□□ 0.79
SNX12-206ENST00000622259 CELF2O95319 508 aaKnown RBP19.96■□□□□ 0.79
SNX12-206ENST00000622259 IL13P35225 146 aa19.96■□□□□ 0.79
SNX12-206ENST00000622259 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
SNX12-206ENST00000622259 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
SNX12-206ENST00000622259 A1BGP04217 495 aa19.95■□□□□ 0.78
SNX12-206ENST00000622259 USP50Q70EL3 339 aaPredicted RBP19.95■□□□□ 0.78
SNX12-206ENST00000622259 EIF6P56537 245 aaKnown RBP19.94■□□□□ 0.78
SNX12-206ENST00000622259 SLC51AQ86UW1 340 aa19.94■□□□□ 0.78
SNX12-206ENST00000622259 JDP2Q8WYK2 163 aa19.94■□□□□ 0.78
SNX12-206ENST00000622259 NBPF5PQ86XG9 351 aaPredicted RBP19.93■□□□□ 0.78
SNX12-206ENST00000622259 HHIPL1Q96JK4 782 aa19.93■□□□□ 0.78
SNX12-206ENST00000622259 HEG1Q9ULI3 1381 aa19.93■□□□□ 0.78
SNX12-206ENST00000622259 MTHFSDQ2M296 383 aaKnown RBP19.92■□□□□ 0.78
SNX12-206ENST00000622259 DZIP3Q86Y13 1208 aaKnown RBP19.92■□□□□ 0.78
SNX12-206ENST00000622259 TTC5Q8N0Z6 440 aa19.92■□□□□ 0.78
SNX12-206ENST00000622259 PSMD1Q99460 953 aa19.92■□□□□ 0.78
SNX12-206ENST00000622259 GLIS2Q9BZE0 524 aaPredicted RBP19.92■□□□□ 0.78
SNX12-206ENST00000622259 PIP4K2AP48426 406 aaPredicted RBP19.91■□□□□ 0.78
SNX12-206ENST00000622259 ZNF408Q9H9D4 720 aa19.9■□□□□ 0.78
SNX12-206ENST00000622259 HMOX1P09601 288 aa19.89■□□□□ 0.77
SNX12-206ENST00000622259 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
SNX12-206ENST00000622259 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
SNX12-206ENST00000622259 ALDH1B1P30837 517 aa19.87■□□□□ 0.77
SNX12-206ENST00000622259 LARGE2Q8N3Y3 721 aa19.87■□□□□ 0.77
SNX12-206ENST00000622259 TEX13AQ9BXU3 409 aaPredicted RBP19.87■□□□□ 0.77
SNX12-206ENST00000622259 ADARB2Q9NS39 739 aaKnown RBP19.87■□□□□ 0.77
SNX12-206ENST00000622259 NOGQ13253 232 aa19.86■□□□□ 0.77
SNX12-206ENST00000622259 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
SNX12-206ENST00000622259 GPRC5DQ9NZD1 345 aa19.86■□□□□ 0.77
SNX12-206ENST00000622259 DLK2Q6UY11 383 aa19.85■□□□□ 0.77
SNX12-206ENST00000622259 KCNQ3O43525 872 aa19.84■□□□□ 0.77
SNX12-206ENST00000622259 HIRAP54198 1017 aaPredicted RBP19.84■□□□□ 0.77
SNX12-206ENST00000622259 CLEC4GQ6UXB4 293 aa19.84■□□□□ 0.77
SNX12-206ENST00000622259 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
SNX12-206ENST00000622259 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
SNX12-206ENST00000622259 PGAP2Q9UHJ9 254 aa19.84■□□□□ 0.77
SNX12-206ENST00000622259 FAM155AB1AL88 458 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms