RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 LMOD1P29536 600 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-209ENST00000622134 RNF41Q9H4P4 317 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-209ENST00000622134 GLRX3O76003 335 aaKnown RBP12.21□□□□□ -0.45
COL25A1-209ENST00000622134 UQCRFS1P1P0C7P4 283 aa12.21□□□□□ -0.45
COL25A1-209ENST00000622134 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
COL25A1-209ENST00000622134 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
COL25A1-209ENST00000622134 PIP4K2AP48426 406 aaPredicted RBP12.21□□□□□ -0.46
COL25A1-209ENST00000622134 OGFRQ9NZT2 677 aa12.21□□□□□ -0.46
COL25A1-209ENST00000622134 ZFYVE9O95405 1425 aa12.21□□□□□ -0.46
COL25A1-209ENST00000622134 ABCC1P33527 1531 aa12.21□□□□□ -0.46
COL25A1-209ENST00000622134 NEMFO60524 1076 aa12.21□□□□□ -0.46
COL25A1-209ENST00000622134 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.46
COL25A1-209ENST00000622134 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.46
COL25A1-209ENST00000622134 NOLC1Q14978 699 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL25A1-209ENST00000622134 ACSBG1Q96GR2 724 aa12.2□□□□□ -0.46
COL25A1-209ENST00000622134 ZBTB3Q9H5J0 574 aa12.2□□□□□ -0.46
COL25A1-209ENST00000622134 IMMTQ16891 758 aaKnown RBP12.2□□□□□ -0.46
COL25A1-209ENST00000622134 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-209ENST00000622134 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
COL25A1-209ENST00000622134 FIBPO43427 364 aa12.2□□□□□ -0.46
COL25A1-209ENST00000622134 TNNT1P13805 278 aa12.2□□□□□ -0.46
COL25A1-209ENST00000622134 CCDC183Q5T5S1 534 aa12.2□□□□□ -0.46
COL25A1-209ENST00000622134 LDHAL6AQ6ZMR3 332 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
COL25A1-209ENST00000622134 NPHP4O75161 1426 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-209ENST00000622134 TRIM21P19474 475 aaKnown RBP12.19□□□□□ -0.46
COL25A1-209ENST00000622134 GPTP24298 496 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 AXDND1Q5T1B0 1012 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-209ENST00000622134 ZNF396Q96N95 335 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-209ENST00000622134 GBP3Q9H0R5 595 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 NLRP1Q9C000 1473 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 CYP46A1Q9Y6A2 500 aa12.19□□□□□ -0.46
COL25A1-209ENST00000622134 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 BAG4O95429 457 aaKnown RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 GABPB1Q06547 395 aaPredicted RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 C8orf34Q49A92 452 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 ZNF444Q8N0Y2 327 aaPredicted RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 UTP14AQ9BVJ6 771 aaKnown RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 SDF4Q9BRK5 362 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 SSFA2P28290 1259 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 PDE6BP35913 854 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 CCDC178Q5BJE1 867 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 UTP14CQ5TAP6 766 aaKnown RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 DDX11Q96FC9 970 aa12.18□□□□□ -0.46
COL25A1-209ENST00000622134 ZNF219Q9P2Y4 722 aaPredicted RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 CCNL1Q9UK58 526 aaPredicted RBP12.18□□□□□ -0.46
COL25A1-209ENST00000622134 SMC2O95347 1197 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 EPS15P42566 896 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 CCDC85AQ96PX6 553 aaPredicted RBP12.17□□□□□ -0.46
COL25A1-209ENST00000622134 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ALDH1L1O75891 902 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ZNF76P36508 570 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 PARP10Q53GL7 1025 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
COL25A1-209ENST00000622134 B4DLN1 442 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
COL25A1-209ENST00000622134 KRT85P78386 507 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 FLIIQ13045 1269 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 SUPT20HQ8NEM7 779 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 CABLES1Q8TDN4 633 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ANKRD2Q9GZV1 360 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 OLFM4Q6UX06 510 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ZNF804AQ7Z570 1209 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
COL25A1-209ENST00000622134 ADGRL2O95490 1459 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 MAST1Q9Y2H9 1570 aa12.17□□□□□ -0.46
COL25A1-209ENST00000622134 CUL5Q93034 780 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 NAPBQ9H115 298 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL25A1-209ENST00000622134 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 IVLP07476 585 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 NUP62CLQ9H1M0 184 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 USP25Q9UHP3 1055 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 DZIP3Q86Y13 1208 aaKnown RBP12.16□□□□□ -0.46
COL25A1-209ENST00000622134 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
COL25A1-209ENST00000622134 PLCG2P16885 1265 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 PRAG1Q86YV5 1406 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 ADCY5O95622 1261 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 ODF2Q5BJF6 829 aa12.15□□□□□ -0.46
COL25A1-209ENST00000622134 BLOC1S2Q6QNY1 142 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms