RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 SMC2O95347 1197 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 CDC37L1Q7L3B6 337 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 RBM8AQ9Y5S9 174 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 ZBTB9Q96C00 473 aa13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA11-203ENST00000622044 RAD50Q92878 1312 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 PNPLA6Q8IY17 1366 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 PPP6R1Q9UPN7 881 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 ATP10DQ9P241 1426 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 ME1P48163 572 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 PTH1RQ03431 593 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 FAM177A1Q8N128 213 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
PCDHGA11-203ENST00000622044 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 NAA30Q147X3 362 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 EYA1Q99502 592 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 RGS12O14924 1447 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 KIDINS220Q9ULH0 1771 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 A0A087WWV3 80 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 GNL2Q13823 731 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 DNAAF4Q8WXU2 420 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 SH2B1Q9NRF2 756 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-203ENST00000622044 PTPN14Q15678 1187 aa13.46□□□□□ -0.25
PCDHGA11-203ENST00000622044 FAM227BQ96M60 508 aa13.46□□□□□ -0.25
PCDHGA11-203ENST00000622044 ADGRB3O60242 1522 aa13.46□□□□□ -0.25
PCDHGA11-203ENST00000622044 ME3Q16798 604 aa13.46□□□□□ -0.25
PCDHGA11-203ENST00000622044 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
PCDHGA11-203ENST00000622044 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
PCDHGA11-203ENST00000622044 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA11-203ENST00000622044 CBX8Q9HC52 389 aa13.46□□□□□ -0.26
PCDHGA11-203ENST00000622044 ADGRB1O14514 1584 aa13.46□□□□□ -0.26
PCDHGA11-203ENST00000622044 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 MLH3Q9UHC1 1453 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 CEP135Q66GS9 1140 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 MPRIPQ6WCQ1 1025 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 RIC3Q7Z5B4 369 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 KIAA1524Q8TCG1 905 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 MYL6BP14649 208 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 CCT2P78371 535 aaKnown RBP13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 NDUFB9Q9Y6M9 179 aa13.45□□□□□ -0.26
PCDHGA11-203ENST00000622044 NEO1Q92859 1461 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 BIN1O00499 593 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 ISM2Q6H9L7 571 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 ADGRB2O60241 1585 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 KIF24Q5T7B8 1368 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 DMTNQ08495 405 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 NMIQ13287 307 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 STK11IPQ8N1F8 1099 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 CREB3L3Q68CJ9 461 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 ABCC3O15438 1527 aa13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 COL3A1P02461 1466 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA11-203ENST00000622044 SKILP12757 684 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 PRDM4Q9UKN5 801 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 SETBP1Q9Y6X0 1596 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 BRF1Q92994 677 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 EDC3Q96F86 508 aaKnown RBP13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 TPCN1Q9ULQ1 816 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 MAP3K2Q9Y2U5 619 aa13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 INO80Q9ULG1 1556 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA11-203ENST00000622044 JAK2O60674 1132 aa13.42□□□□□ -0.26
PCDHGA11-203ENST00000622044 LSG1Q9H089 658 aaKnown RBP13.42□□□□□ -0.26
PCDHGA11-203ENST00000622044 KCNF1Q9H3M0 494 aa13.42□□□□□ -0.26
PCDHGA11-203ENST00000622044 TMX1Q9H3N1 280 aa13.42□□□□□ -0.26
PCDHGA11-203ENST00000622044 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
PCDHGA11-203ENST00000622044 RAB11FIP4Q86YS3 637 aa13.42□□□□□ -0.26
PCDHGA11-203ENST00000622044 NR1I2O75469 434 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 VPS53Q5VIR6 699 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 KIAA0232Q92628 1395 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 TPM4P67936 248 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 NEXNQ0ZGT2 675 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 ANKRD1Q15327 319 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 NRXN1Q9ULB1 1477 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 MNS1Q8NEH6 495 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 GTPBP4Q9BZE4 634 aaKnown RBP13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 CAMSAP1Q5T5Y3 1602 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms