RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 CADPS2Q86UW7 1296 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
AGRN-210ENST00000620552 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
AGRN-210ENST00000620552 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 UBE3BQ7Z3V4 1068 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 PDE4BQ07343 736 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 TMEM67Q5HYA8 995 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 F8W031 263 aaPredicted RBP16.38■□□□□ 0.21
AGRN-210ENST00000620552 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
AGRN-210ENST00000620552 SETDB2Q96T68 719 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 SPA17Q15506 151 aa16.38■□□□□ 0.21
AGRN-210ENST00000620552 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 CA8P35219 290 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 TAF3Q5VWG9 929 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■□□□□ 11
AGRN-210ENST00000620552 GRPEL1Q9HAV7 217 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 SYCE3A1L190 88 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 RBM10P98175 930 aaKnown RBP16.37■□□□□ 0.21
AGRN-210ENST00000620552 EVI5LQ96CN4 794 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 PLCD4Q9BRC7 762 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 NCOA1Q15788 1441 aa16.37■□□□□ 0.21
AGRN-210ENST00000620552 CETN2P41208 172 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 HAND2P61296 217 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 TNRQ92752 1358 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 FGFR1OPO95684 399 aaKnown RBP16.36■□□□□ 0.21
AGRN-210ENST00000620552 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
AGRN-210ENST00000620552 ARHGAP29Q52LW3 1261 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
AGRN-210ENST00000620552 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
AGRN-210ENST00000620552 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
AGRN-210ENST00000620552 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
AGRN-210ENST00000620552 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
AGRN-210ENST00000620552 KIF5BP33176 963 aa16.35■□□□□ 0.21
AGRN-210ENST00000620552 ERLIN1O75477 346 aa16.35■□□□□ 0.21
AGRN-210ENST00000620552 LDHCP07864 332 aa16.35■□□□□ 0.21
AGRN-210ENST00000620552 RAB11FIP4Q86YS3 637 aa16.35■□□□□ 0.21
AGRN-210ENST00000620552 CALML4Q96GE6 196 aa16.35■□□□□ 0.21
AGRN-210ENST00000620552 CNNM3Q8NE01 707 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 TOM1O60784 492 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 GSTO1P78417 241 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 CCDC178Q5BJE1 867 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 EZRP15311 586 aaKnown RBP16.34■□□□□ 0.21
AGRN-210ENST00000620552 CTNNBL1Q8WYA6 563 aaPredicted RBP16.34■□□□□ 0.21
AGRN-210ENST00000620552 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 TNNT1P13805 278 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 FBLN1P23142 703 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 PLCD3Q8N3E9 789 aa16.34■□□□□ 0.21
AGRN-210ENST00000620552 CCDC12Q8WUD4 166 aaPredicted RBP16.33■□□□□ 0.21
AGRN-210ENST00000620552 SH2B1Q9NRF2 756 aaPredicted RBP16.33■□□□□ 0.21
AGRN-210ENST00000620552 PIK3R4Q99570 1358 aa16.33■□□□□ 0.21
AGRN-210ENST00000620552 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.21
AGRN-210ENST00000620552 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.21
AGRN-210ENST00000620552 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
AGRN-210ENST00000620552 ANXA1P04083 346 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 DNA2P51530 1060 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
AGRN-210ENST00000620552 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.2
AGRN-210ENST00000620552 C20orf194Q5TEA3 1177 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 KDM5BQ9UGL1 1544 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 KIAA0754O94854 1291 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 CASQ1P31415 396 aa16.33■□□□□ 0.2
AGRN-210ENST00000620552 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 HMGN5P82970 282 aaKnown RBP16.32■□□□□ 0.2
AGRN-210ENST00000620552 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
AGRN-210ENST00000620552 PICALMQ13492 652 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
AGRN-210ENST00000620552 VTI1AQ96AJ9 217 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 VPS36Q86VN1 386 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 CHPF2Q9P2E5 772 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 MTERF4Q7Z6M4 381 aaKnown RBP16.32■□□□□ 0.2
AGRN-210ENST00000620552 ANO10Q9NW15 660 aa16.32■□□□□ 0.2
AGRN-210ENST00000620552 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.28e-7■■□□□ 14.5
AGRN-210ENST00000620552 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
AGRN-210ENST00000620552 PPFIA3O75145 1194 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 BICD1Q96G01 975 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 TMX1Q9H3N1 280 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 PPIP5K1Q6PFW1 1433 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 USP8P40818 1118 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
AGRN-210ENST00000620552 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
AGRN-210ENST00000620552 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
AGRN-210ENST00000620552 MMRN2Q9H8L6 949 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms