RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ERICH6BQ5W0A0 696 aa10.19□□□□□ -0.78
CPNE3-209ENST00000620393 KSR2Q6VAB6 950 aa10.19□□□□□ -0.78
CPNE3-209ENST00000620393 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
CPNE3-209ENST00000620393 FTSJ3Q8IY81 847 aaKnown RBP10.19□□□□□ -0.78
CPNE3-209ENST00000620393 LINC00116Q8NCU8 138 aa10.19□□□□□ -0.78
CPNE3-209ENST00000620393 LRRC4BQ9NT99 713 aa10.19□□□□□ -0.78
CPNE3-209ENST00000620393 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 PI4KAP2A4QPH2 592 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 F6X3S4 739 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 EIF5P55010 431 aaKnown RBP10.18□□□□□ -0.78
CPNE3-209ENST00000620393 TXNRD1Q16881 649 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 INTS3Q68E01 1043 aaKnown RBP10.18□□□□□ -0.78
CPNE3-209ENST00000620393 TMEM57Q8N5G2 664 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 PI4KAP1Q8N8J0 262 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 CRBNQ96SW2 442 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 ZBTB1Q9Y2K1 713 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 COG6Q9Y2V7 657 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
CPNE3-209ENST00000620393 ITGB4P16144 1822 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 ABCC4O15439 1325 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 DOT1LQ8TEK3 1739 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 RPS6KA4O75676 772 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 CCT4P50991 539 aaKnown RBP10.17□□□□□ -0.78
CPNE3-209ENST00000620393 TTLL7Q6ZT98 887 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 RIC3Q7Z5B4 369 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
CPNE3-209ENST00000620393 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 PLBD2Q8NHP8 589 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 EXOC6Q8TAG9 804 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 DNAAF4Q8WXU2 420 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 MAP3K2Q9Y2U5 619 aa10.17□□□□□ -0.78
CPNE3-209ENST00000620393 PAPPAQ13219 1627 aa10.16□□□□□ -0.78
CPNE3-209ENST00000620393 ZBTB7BO15156 539 aaPredicted RBP10.16□□□□□ -0.78
CPNE3-209ENST00000620393 CLCN6P51797 869 aa10.16□□□□□ -0.78
CPNE3-209ENST00000620393 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
CPNE3-209ENST00000620393 MVPQ14764 893 aaKnown RBP10.16□□□□□ -0.78
CPNE3-209ENST00000620393 SLC4A10Q6U841 1118 aa10.16□□□□□ -0.78
CPNE3-209ENST00000620393 CAMKK2Q96RR4 588 aa10.16□□□□□ -0.78
CPNE3-209ENST00000620393 DDX19BQ9UMR2 479 aa10.16□□□□□ -0.78
CPNE3-209ENST00000620393 BRWD3Q6RI45 1802 aa10.16□□□□□ -0.78
CPNE3-209ENST00000620393 NHSQ6T4R5 1651 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 A0A087WZG4 1122 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 ERVV-1B6SEH8 477 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-209ENST00000620393 AAMPQ13685 434 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 BEND3Q5T5X7 828 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 ITPRIPQ8IWB1 547 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 ARXQ96QS3 562 aa10.15□□□□□ -0.78
CPNE3-209ENST00000620393 METTL22Q9BUU2 404 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-209ENST00000620393 CHMP4BQ9H444 224 aaKnown RBP10.15□□□□□ -0.78
CPNE3-209ENST00000620393 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-209ENST00000620393 ADCY9O60503 1353 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 VIRMAQ69YN4 1812 aaKnown RBP10.14□□□□□ -0.79
CPNE3-209ENST00000620393 UBR2Q8IWV8 1755 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 ALDH1L1O75891 902 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 BAG6P46379 1132 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 EN1Q05925 392 aaPredicted RBP10.14□□□□□ -0.79
CPNE3-209ENST00000620393 KIF6Q6ZMV9 814 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 DZIP3Q86Y13 1208 aaKnown RBP10.14□□□□□ -0.79
CPNE3-209ENST00000620393 LINS1Q8NG48 757 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 SRCIN1Q9C0H9 1055 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
CPNE3-209ENST00000620393 RTCBQ9Y3I0 505 aaKnown RBP10.14□□□□□ -0.79
CPNE3-209ENST00000620393 MAP3K15Q6ZN16 1313 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 GNPATO15228 680 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 NEXNQ0ZGT2 675 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
CPNE3-209ENST00000620393 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 EZH2Q15910 746 aaKnown RBP10.13□□□□□ -0.79
CPNE3-209ENST00000620393 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 AK7Q96M32 723 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 ZBTB3Q9H5J0 574 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
CPNE3-209ENST00000620393 RGL2O15211 777 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 IGKV5-2P06315 115 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 HLFQ16534 295 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 HSP90AB3PQ58FF7 597 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
CPNE3-209ENST00000620393 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
CPNE3-209ENST00000620393 MYD88Q99836 296 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 ISCA1Q9BUE6 129 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 USP44Q9H0E7 712 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 PPP4R2Q9NY27 417 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 BTAF1O14981 1849 aa10.12□□□□□ -0.79
CPNE3-209ENST00000620393 NEURL1BA8MQ27 555 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 ATP5J2-PTCD1G3V325 749 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 SMIM5Q71RC9 77 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 DEFB132Q7Z7B7 95 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 AMIGO3Q86WK7 504 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 NARFQ9UHQ1 456 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
CPNE3-209ENST00000620393 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 C5P01031 1676 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 GNAI3P08754 354 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 SSFA2P28290 1259 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 RFC4P35249 363 aa10.1□□□□□ -0.79
CPNE3-209ENST00000620393 GCKRQ14397 625 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms