RNA–Protein interactions for RNA: ENST00000619533.1

CNTNAP4-208, Transcript of contactin associated protein like 4, human

Gene CNTNAP4, Length 1,856 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP4-208	ENST00000619533	IL6ST	P40189	918 aa	Predicted RBP	8.03	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	TTLL6	Q8N841	843 aa		8.03	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	NMRK2	Q9NPI5	230 aa		8.03	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	TBC1D2B	Q9UPU7	963 aa		8.03	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	KDM2B	Q8NHM5	1336 aa		8.03	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	UBR2	Q8IWV8	1755 aa		8.03	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	NPHP1	O15259	732 aa		8.02	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	KCNQ3	O43525	872 aa		8.02	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	ATXN8OS	P0DMR3	200 aa		8.02	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	TBC1D9B	Q66K14	1250 aa		8.02	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	ARFGEF1	Q9Y6D6	1849 aa		8.02	□□□□□ -1.12
CNTNAP4-208	ENST00000619533	BRCA1	P38398	1863 aa	Known RBP	8.02	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	NEFM	P07197	916 aa		8.02	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	APLP1	P51693	650 aa		8.02	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	ZNF622	Q969S3	477 aa	Known RBP eCLIP	8.02	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PDZRN3	Q9UPQ7	1066 aa		8.02	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CEMIP	Q8WUJ3	1361 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	HTATSF1	O43719	755 aa	Known RBP	8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PDE6B	P35913	854 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	RASSF7	Q02833	373 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	MCM10	Q7L590	875 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	RBM46	Q8TBY0	533 aa	Known RBP	8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SETDB2	Q96T68	719 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	BRIP1	Q9BX63	1249 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	RRAGC	Q9HB90	399 aa		8.01	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	AFDN	P55196	1824 aa	Known RBP	8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SNRPA1	P09661	255 aa	Known RBP	8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	LMNB1	P20700	586 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	DZIP3	Q86Y13	1208 aa	Known RBP	8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CCDC24	Q8N4L8	307 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	USP16	Q9Y5T5	823 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CARMIL3	Q8ND23	1372 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	IGSF3	O75054	1194 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CAMTA2	O94983	1202 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	ST5	P78524	1137 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	DCTN1	Q14203	1278 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PRR5L	Q6MZQ0	368 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CNBD1	Q8NA66	436 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	NRXN2	Q9P2S2	1712 aa		8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SIPA1L3	O60292	1781 aa	Predicted RBP	8	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PIP4K2A	P48426	406 aa	Predicted RBP	7.99	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	TAF7	Q15545	349 aa	Predicted RBP	7.99	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	IFNLR1	Q8IU57	520 aa	Predicted RBP	7.99	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	ZNF652	Q9Y2D9	606 aa		7.99	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.99	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PRAMEF22	A3QJZ6	481 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	C21orf2	O43822	256 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CDK11B	P21127	795 aa	Known RBP	7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	FSTL1	Q12841	308 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PNISR	Q8TF01	805 aa	Known RBP	7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SCN7A	Q01118	1682 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	STYK1	Q6J9G0	422 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CLEC4G	Q6UXB4	293 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	CNKSR1	Q969H4	720 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PNN	Q9H307	717 aa	Known RBP	7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	MIS18A	Q9NYP9	233 aa		7.98	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	DLEC1	Q9Y238	1755 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	GLTPD2	A6NH11	291 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	NFKBIE	O00221	500 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	VEGFA	P15692	232 aa	Predicted RBP	7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	DPY19L2	Q6NUT2	758 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SMC1B	Q8NDV3	1235 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	MASTL	Q96GX5	879 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	ARID3A	Q99856	593 aa		7.97	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	MAPK8IP3	Q9UPT6	1336 aa		7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	FAM177B	A6PVY3	158 aa		7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	PRELP	P51888	382 aa		7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	BRPF1	P55201	1214 aa	Predicted RBP	7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SOGA3	Q5TF21	947 aa		7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	TPTE2	Q6XPS3	522 aa		7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	NIP7	Q9Y221	180 aa	Known RBP eCLIP	7.96	□□□□□ -1.13
CNTNAP4-208	ENST00000619533	SBF1	O95248	1867 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	NBPF26	B4DH59	902 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	SRGN	P10124	158 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	GTF2E1	P29083	439 aa	Predicted RBP	7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	NFE2L2	Q16236	605 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	ERFE	Q4G0M1	354 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	PRPF40B	Q6NWY9	871 aa	Known RBP	7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	NBPF10	Q6P3W6	841 aa	Known RBP	7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	NGEF	Q8N5V2	710 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	NBPF15	Q8N660	670 aa		7.96	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	ANKRD31	Q8N7Z5	1873 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	RGL2	O15211	777 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	NPR1	P16066	1061 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	VASP	P50552	380 aa	Predicted RBP	7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	IFFO2	Q5TF58	517 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	DNAJC5G	Q8N7S2	189 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	CHMP4A	Q9BY43	222 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	TAOK3	Q9H2K8	898 aa		7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	RRP7A	Q9Y3A4	280 aa	Known RBP	7.95	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	LTBP3	Q9NS15	1303 aa		7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	KIF6	Q6ZMV9	814 aa		7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	BCOR	Q6W2J9	1755 aa		7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	UTRN	P46939	3433 aa		7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	EIF4A1	P60842	406 aa	Known RBP	7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	HTRA3	P83110	453 aa		7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	HLF	Q16534	295 aa		7.94	□□□□□ -1.14
CNTNAP4-208	ENST00000619533	CCDC93	Q567U6	631 aa		7.94	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms