RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
SEMA3B-214ENST00000619119 RGPD2P0DJD1 1756 aa19■□□□□ 0.63
SEMA3B-214ENST00000619119 STK31Q9BXU1 1019 aa19■□□□□ 0.63
SEMA3B-214ENST00000619119 DDX41Q9UJV9 622 aaKnown RBP19■□□□□ 0.63
SEMA3B-214ENST00000619119 TBC1D9Q6ZT07 1266 aa19■□□□□ 0.63
SEMA3B-214ENST00000619119 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
SEMA3B-214ENST00000619119 TULP2O00295 520 aa18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 CTIFO43310 598 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 EIF2S2P20042 333 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 ANKRD45Q5TZF3 282 aa18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 SIRT2Q8IXJ6 389 aa18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 PYCARDQ9ULZ3 195 aa18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 KCNQ3O43525 872 aa18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-214ENST00000619119 CSB-PGBD3P0DP91 1061 aa18.98■□□□□ 0.63
SEMA3B-214ENST00000619119 PLEKHO1Q53GL0 409 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-214ENST00000619119 TEFQ10587 303 aa18.98■□□□□ 0.63
SEMA3B-214ENST00000619119 NPHP3Q7Z494 1330 aa18.98■□□□□ 0.63
SEMA3B-214ENST00000619119 TNNT3P45378 269 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 MBD3O95983 291 aa18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 FOXD4L6Q3SYB3 417 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 FOXD4L3Q6VB84 417 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 MEIS3Q99687 375 aa18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 ZDHHC9Q9Y397 364 aa18.97■□□□□ 0.63
SEMA3B-214ENST00000619119 RGS12O14924 1447 aa18.96■□□□□ 0.63
SEMA3B-214ENST00000619119 INTS3Q68E01 1043 aaKnown RBP18.96■□□□□ 0.63
SEMA3B-214ENST00000619119 ERBB3P21860 1342 aa18.96■□□□□ 0.63
SEMA3B-214ENST00000619119 APBB1O00213 710 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 KRT222Q8N1A0 295 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 PTPRCP08575 1304 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 SLIT3O75094 1523 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 TRPM3Q9HCF6 1732 aaPredicted RBP18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 BMP2KLQ5H9B9 411 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 HDGFL1Q5TGJ6 251 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 ST7Q9NRC1 585 aa18.95■□□□□ 0.62
SEMA3B-214ENST00000619119 FLIIQ13045 1269 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 AKAP4Q5JQC9 854 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 FEZ2Q9UHY8 353 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 BTBD11A6QL63 1104 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 NUCB1Q02818 461 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 KIAA1524Q8TCG1 905 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 MORC2Q9Y6X9 1032 aaPredicted RBP18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 PXDNQ92626 1479 aa18.94■□□□□ 0.62
SEMA3B-214ENST00000619119 SPC24Q8NBT2 197 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 KIF18AQ8NI77 898 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 TMX1Q9H3N1 280 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 MED1Q15648 1581 aaPredicted RBP18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 LMTK3Q96Q04 1460 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 ANXA1P04083 346 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 RABEP1Q15276 862 aa18.93■□□□□ 0.62
SEMA3B-214ENST00000619119 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
SEMA3B-214ENST00000619119 PHAXQ9H814 394 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-214ENST00000619119 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
SEMA3B-214ENST00000619119 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
SEMA3B-214ENST00000619119 HCLS1P14317 486 aaPredicted RBP18.91■□□□□ 0.62
SEMA3B-214ENST00000619119 TSPYL1Q9H0U9 437 aa18.91■□□□□ 0.62
SEMA3B-214ENST00000619119 CEMIPQ8WUJ3 1361 aa18.91■□□□□ 0.62
SEMA3B-214ENST00000619119 KCNF1Q9H3M0 494 aa18.91■□□□□ 0.62
SEMA3B-214ENST00000619119 GDPD2Q9HCC8 539 aa18.91■□□□□ 0.62
SEMA3B-214ENST00000619119 DCCP43146 1447 aa18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 RNMTO43148 476 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 RGPD5Q99666 1765 aa18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 HNRNPH2P55795 449 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 CWC22Q9HCG8 908 aaKnown RBP18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 SLAIN2Q9P270 581 aa18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
SEMA3B-214ENST00000619119 GCC1Q96CN9 775 aa18.89■□□□□ 0.62
SEMA3B-214ENST00000619119 C16orf45Q96MC5 204 aaPredicted RBP18.89■□□□□ 0.62
SEMA3B-214ENST00000619119 HDAC5Q9UQL6 1122 aa18.89■□□□□ 0.61
SEMA3B-214ENST00000619119 TNS3Q68CZ2 1445 aa18.89■□□□□ 0.61
SEMA3B-214ENST00000619119 LRRC37A3O60309 1634 aa18.88■□□□□ 0.61
SEMA3B-214ENST00000619119 CEP85Q6P2H3 762 aa18.88■□□□□ 0.61
SEMA3B-214ENST00000619119 CHPF2Q9P2E5 772 aa18.88■□□□□ 0.61
SEMA3B-214ENST00000619119 RSPH14Q9UHP6 348 aa18.88■□□□□ 0.61
SEMA3B-214ENST00000619119 PRAMEF22A3QJZ6 481 aa18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 RAD51AP2Q09MP3 1159 aa18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 UVSSAQ2YD98 709 aa18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.87■□□□□ 0.619e-11■□□□□ 9.8
SEMA3B-214ENST00000619119 V9GYY5 206 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 ALS2Q96Q42 1657 aa18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 PHF14O94880 888 aa18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 FAM184AQ8NB25 1140 aa18.87■□□□□ 0.61
SEMA3B-214ENST00000619119 GADD45BO75293 160 aaPredicted RBP18.86■□□□□ 0.61
SEMA3B-214ENST00000619119 APPP05067 770 aa18.86■□□□□ 0.61
SEMA3B-214ENST00000619119 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
SEMA3B-214ENST00000619119 SLC39A6Q13433 755 aa18.86■□□□□ 0.61
SEMA3B-214ENST00000619119 LOC102724159A0A0B4J2E5 919 aa18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 CDC45O75419 566 aa18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 PWP2Q15269 919 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 C16orf71Q8IYS4 520 aaPredicted RBP18.85■□□□□ 0.61
SEMA3B-214ENST00000619119 ANKRD44Q8N8A2 993 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms