RNA–Protein interactions for RNA: ENST00000618829.4

SYNRG-224, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 3,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-224ENST00000618829 MAPK8IP2Q13387 824 aaPredicted RBP8.62□□□□□ -1.03
SYNRG-224ENST00000618829 PPP1R42Q7Z4L9 355 aa8.62□□□□□ -1.03
SYNRG-224ENST00000618829 SRCIN1Q9C0H9 1055 aa8.62□□□□□ -1.03
SYNRG-224ENST00000618829 ZDHHC9Q9Y397 364 aa8.62□□□□□ -1.03
SYNRG-224ENST00000618829 VASPP50552 380 aaPredicted RBP8.61□□□□□ -1.03
SYNRG-224ENST00000618829 KDRP35968 1356 aa8.61□□□□□ -1.03
SYNRG-224ENST00000618829 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
SYNRG-224ENST00000618829 CLEC17AQ6ZS10 378 aa8.61□□□□□ -1.03
SYNRG-224ENST00000618829 LARP6Q9BRS8 491 aaKnown RBP8.61□□□□□ -1.03
SYNRG-224ENST00000618829 LGR6Q9HBX8 967 aa8.61□□□□□ -1.03
SYNRG-224ENST00000618829 TEFQ10587 303 aa8.61□□□□□ -1.03
SYNRG-224ENST00000618829 SYCE3A1L190 88 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
SYNRG-224ENST00000618829 GPT2Q8TD30 523 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 CHPF2Q9P2E5 772 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 BRWD3Q6RI45 1802 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 PI4KAP2A4QPH2 592 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 MSNP26038 577 aaKnown RBP8.6□□□□□ -1.03
SYNRG-224ENST00000618829 MCM2P49736 904 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 PI4KAP1Q8N8J0 262 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 KCNQ3O43525 872 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 NBPF7P0C2Y1 421 aaPredicted RBP8.6□□□□□ -1.03
SYNRG-224ENST00000618829 PSME1Q06323 249 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 MPRIPQ6WCQ1 1025 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 RNF214Q8ND24 703 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 RBSNQ9H1K0 784 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 GDPD2Q9HCC8 539 aa8.6□□□□□ -1.03
SYNRG-224ENST00000618829 KIAA1211Q6ZU35 1233 aa8.59□□□□□ -1.03
SYNRG-224ENST00000618829 RHPN1Q8TCX5 695 aa8.59□□□□□ -1.03
SYNRG-224ENST00000618829 LRRC59Q96AG4 307 aaKnown RBP8.59□□□□□ -1.03
SYNRG-224ENST00000618829 FBXO3Q9UK99 471 aa8.59□□□□□ -1.03
SYNRG-224ENST00000618829 NSFL1CQ9UNZ2 370 aaKnown RBP8.59□□□□□ -1.03
SYNRG-224ENST00000618829 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
SYNRG-224ENST00000618829 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
SYNRG-224ENST00000618829 ESCO1Q5FWF5 840 aa8.59□□□□□ -1.03
SYNRG-224ENST00000618829 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
SYNRG-224ENST00000618829 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
SYNRG-224ENST00000618829 SALL3Q9BXA9 1300 aa8.59□□□□□ -1.03
SYNRG-224ENST00000618829 BTBD11A6QL63 1104 aa8.59□□□□□ -1.04
SYNRG-224ENST00000618829 ZNF445P59923 1031 aa8.59□□□□□ -1.04
SYNRG-224ENST00000618829 NBPF6Q5VWK0 638 aa8.59□□□□□ -1.04
SYNRG-224ENST00000618829 ZNF530Q6P9A1 599 aaPredicted RBP8.59□□□□□ -1.04
SYNRG-224ENST00000618829 NBPF4Q96M43 638 aa8.59□□□□□ -1.04
SYNRG-224ENST00000618829 IL25Q9H293 177 aa8.59□□□□□ -1.04
SYNRG-224ENST00000618829 DNAAF4Q8WXU2 420 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 TMEM63CQ9P1W3 806 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 DTNBO60941 627 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 SSH3Q8TE77 659 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 ARID3AQ99856 593 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 C9orf78Q9NZ63 289 aaPredicted RBP8.58□□□□□ -1.04
SYNRG-224ENST00000618829 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 RAB11FIP3O75154 756 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 CNTROBQ8N137 903 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 KIF1BPQ96EK5 621 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 STAP2Q9UGK3 403 aa8.58□□□□□ -1.04
SYNRG-224ENST00000618829 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
SYNRG-224ENST00000618829 NPHP4O75161 1426 aaPredicted RBP8.57□□□□□ -1.04
SYNRG-224ENST00000618829 ANAPC15P60006 121 aa8.57□□□□□ -1.04
SYNRG-224ENST00000618829 EIF4A1P60842 406 aaKnown RBP8.57□□□□□ -1.04
SYNRG-224ENST00000618829 AIMP1Q12904 312 aaKnown RBP8.57□□□□□ -1.04
SYNRG-224ENST00000618829 DIAPH3Q9NSV4 1193 aa8.57□□□□□ -1.04
SYNRG-224ENST00000618829 C1orf141Q5JVX7 400 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 ZSCAN30Q86W11 494 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 PPP1R9BQ96SB3 815 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 BRD1O95696 1058 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 MBD3O95983 291 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 ATXN8OSP0DMR3 200 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 CPA1P15085 419 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
SYNRG-224ENST00000618829 IP6K1Q92551 441 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 MYCNP04198 464 aaPredicted RBP8.56□□□□□ -1.04
SYNRG-224ENST00000618829 CUL4AQ13619 759 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 LRSAM1Q6UWE0 723 aa8.56□□□□□ -1.04
SYNRG-224ENST00000618829 PA2G4Q9UQ80 394 aaKnown RBP8.56□□□□□ -1.04
SYNRG-224ENST00000618829 PTMAP06454 111 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 IFIT2P09913 472 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 KCNJ4P48050 445 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 PLEKHO1Q53GL0 409 aaPredicted RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 CLASRPQ8N2M8 674 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 MAP3K2Q9Y2U5 619 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 DOCK2Q92608 1830 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 HSPA4P34932 840 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 HSP90AB4PQ58FF6 505 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 BEND3Q5T5X7 828 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 BABAM1Q9NWV8 329 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 SGSM2O43147 1006 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 GADD45BO75293 160 aaPredicted RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 CASTP20810 708 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 CWF19L2Q2TBE0 894 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 SYAP1Q96A49 352 aaPredicted RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 INTS4Q96HW7 963 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 SNX14Q9Y5W7 946 aa8.55□□□□□ -1.04
SYNRG-224ENST00000618829 WDR33Q9C0J8 1336 aaKnown RBP8.55□□□□□ -1.04
SYNRG-224ENST00000618829 PSME4Q14997 1843 aa8.54□□□□□ -1.04
SYNRG-224ENST00000618829 POLA2Q14181 598 aa8.54□□□□□ -1.04
SYNRG-224ENST00000618829 AOX1Q06278 1338 aa8.54□□□□□ -1.04
SYNRG-224ENST00000618829 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms