RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
CBWD1-226ENST00000618061 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
CBWD1-226ENST00000618061 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
CBWD1-226ENST00000618061 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
CBWD1-226ENST00000618061 NOL8Q76FK4 1167 aaKnown RBP16.99■□□□□ 0.31
CBWD1-226ENST00000618061 NEK4P51957 841 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 ANKRD13DQ6ZTN6 518 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
CBWD1-226ENST00000618061 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
CBWD1-226ENST00000618061 AOX1Q06278 1338 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 MRC1P22897 1456 aa16.98■□□□□ 0.31
CBWD1-226ENST00000618061 ST18O60284 1047 aa16.97■□□□□ 0.31
CBWD1-226ENST00000618061 TRAK2O60296 914 aa16.97■□□□□ 0.31
CBWD1-226ENST00000618061 SASH1O94885 1247 aa16.97■□□□□ 0.31
CBWD1-226ENST00000618061 PKP1Q13835 747 aa16.97■□□□□ 0.31
CBWD1-226ENST00000618061 GCKRQ14397 625 aa16.97■□□□□ 0.31
CBWD1-226ENST00000618061 CLASRPQ8N2M8 674 aaKnown RBP16.97■□□□□ 0.31
CBWD1-226ENST00000618061 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
CBWD1-226ENST00000618061 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
CBWD1-226ENST00000618061 AACSQ86V21 672 aa16.96■□□□□ 0.31
CBWD1-226ENST00000618061 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
CBWD1-226ENST00000618061 UTYO14607 1347 aa16.96■□□□□ 0.31
CBWD1-226ENST00000618061 CWC27Q6UX04 472 aaKnown RBP16.96■□□□□ 0.31
CBWD1-226ENST00000618061 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
CBWD1-226ENST00000618061 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
CBWD1-226ENST00000618061 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
CBWD1-226ENST00000618061 ABCC6O95255 1503 aa16.95■□□□□ 0.3
CBWD1-226ENST00000618061 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
CBWD1-226ENST00000618061 EVA1CP58658 441 aa16.95■□□□□ 0.3
CBWD1-226ENST00000618061 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
CBWD1-226ENST00000618061 UPF3BQ9BZI7 483 aaKnown RBP16.95■□□□□ 0.3
CBWD1-226ENST00000618061 PCDH11XQ9BZA7 1347 aa16.95■□□□□ 0.3
CBWD1-226ENST00000618061 PCDH11YQ9BZA8 1340 aa16.95■□□□□ 0.3
CBWD1-226ENST00000618061 AFDNP55196 1824 aaKnown RBP16.94■□□□□ 0.3
CBWD1-226ENST00000618061 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
CBWD1-226ENST00000618061 GLI3P10071 1580 aa16.94■□□□□ 0.3
CBWD1-226ENST00000618061 NBPF14Q5TI25 921 aa16.94■□□□□ 0.3
CBWD1-226ENST00000618061 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
CBWD1-226ENST00000618061 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
CBWD1-226ENST00000618061 EAF2Q96CJ1 260 aaPredicted RBP16.94■□□□□ 0.3
CBWD1-226ENST00000618061 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
CBWD1-226ENST00000618061 A1BGP04217 495 aa16.94■□□□□ 0.3
CBWD1-226ENST00000618061 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
CBWD1-226ENST00000618061 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
CBWD1-226ENST00000618061 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
CBWD1-226ENST00000618061 IL2RBP14784 551 aa16.93■□□□□ 0.3
CBWD1-226ENST00000618061 MCCP23508 829 aa16.93■□□□□ 0.3
CBWD1-226ENST00000618061 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
CBWD1-226ENST00000618061 TTLL7Q6ZT98 887 aa16.92■□□□□ 0.3
CBWD1-226ENST00000618061 ECHDC1Q9NTX5 307 aa16.92■□□□□ 0.3
CBWD1-226ENST00000618061 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
CBWD1-226ENST00000618061 SGSM2O43147 1006 aa16.92■□□□□ 0.3
CBWD1-226ENST00000618061 TTC41PQ6P2S7 1318 aa16.92■□□□□ 0.3
CBWD1-226ENST00000618061 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
CBWD1-226ENST00000618061 A0A087WZG4 1122 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 ERC1Q8IUD2 1116 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 TMX3Q96JJ7 454 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 CHAMP1Q96JM3 812 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 CARD10Q9BWT7 1032 aa16.91■□□□□ 0.3
CBWD1-226ENST00000618061 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
CBWD1-226ENST00000618061 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
CBWD1-226ENST00000618061 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
CBWD1-226ENST00000618061 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.3
CBWD1-226ENST00000618061 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.3
CBWD1-226ENST00000618061 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.29
CBWD1-226ENST00000618061 HSPA4P34932 840 aa16.89■□□□□ 0.29
CBWD1-226ENST00000618061 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
CBWD1-226ENST00000618061 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
CBWD1-226ENST00000618061 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
CBWD1-226ENST00000618061 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
CBWD1-226ENST00000618061 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 PLBD2Q8NHP8 589 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
CBWD1-226ENST00000618061 ERVV-2B6SEH9 535 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 BAG4O95429 457 aaKnown RBP16.88■□□□□ 0.29
CBWD1-226ENST00000618061 PTH1RQ03431 593 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
CBWD1-226ENST00000618061 RAD50Q92878 1312 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 CPA1P15085 419 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 ANAPC15P60006 121 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
CBWD1-226ENST00000618061 CHMP3Q9Y3E7 222 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
CBWD1-226ENST00000618061 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 RFX5P48382 616 aaPredicted RBP16.87■□□□□ 0.29
CBWD1-226ENST00000618061 PTPN12Q05209 780 aaKnown RBP16.87■□□□□ 0.29
CBWD1-226ENST00000618061 FAM227BQ96M60 508 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 ZDHHC9Q9Y397 364 aa16.87■□□□□ 0.29
CBWD1-226ENST00000618061 UBR2Q8IWV8 1755 aa16.86■□□□□ 0.29
CBWD1-226ENST00000618061 TFCP2Q12800 502 aa16.86■□□□□ 0.29
CBWD1-226ENST00000618061 MCTP1Q6DN14 999 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms