RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
COL4A2-210ENST00000617564 PDE6BP35913 854 aa16.18■□□□□ 0.18
COL4A2-210ENST00000617564 IL6STP40189 918 aaPredicted RBP16.18■□□□□ 0.18
COL4A2-210ENST00000617564 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
COL4A2-210ENST00000617564 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
COL4A2-210ENST00000617564 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
COL4A2-210ENST00000617564 BRIP1Q9BX63 1249 aa16.18■□□□□ 0.18
COL4A2-210ENST00000617564 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
COL4A2-210ENST00000617564 DDNO94850 711 aaPredicted RBP16.17■□□□□ 0.18
COL4A2-210ENST00000617564 ITGBL1O95965 494 aaPredicted RBP16.17■□□□□ 0.18
COL4A2-210ENST00000617564 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
COL4A2-210ENST00000617564 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
COL4A2-210ENST00000617564 TBC1D9BQ66K14 1250 aa16.17■□□□□ 0.18
COL4A2-210ENST00000617564 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
COL4A2-210ENST00000617564 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
COL4A2-210ENST00000617564 CEMIPQ8WUJ3 1361 aa16.16■□□□□ 0.18
COL4A2-210ENST00000617564 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
COL4A2-210ENST00000617564 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
COL4A2-210ENST00000617564 IL17REQ8NFR9 667 aa16.16■□□□□ 0.18
COL4A2-210ENST00000617564 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
COL4A2-210ENST00000617564 ZNF622Q969S3 477 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL4A2-210ENST00000617564 ABT1Q9ULW3 272 aaKnown RBP16.15■□□□□ 0.18
COL4A2-210ENST00000617564 BCORQ6W2J9 1755 aa16.14■□□□□ 0.17
COL4A2-210ENST00000617564 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
COL4A2-210ENST00000617564 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
COL4A2-210ENST00000617564 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
COL4A2-210ENST00000617564 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
COL4A2-210ENST00000617564 DICER1Q9UPY3 1922 aaKnown RBP16.13■□□□□ 0.17
COL4A2-210ENST00000617564 C21orf2O43822 256 aa16.13■□□□□ 0.17
COL4A2-210ENST00000617564 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
COL4A2-210ENST00000617564 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
COL4A2-210ENST00000617564 CNBD1Q8NA66 436 aa16.13■□□□□ 0.17
COL4A2-210ENST00000617564 CNKSR1Q969H4 720 aa16.13■□□□□ 0.17
COL4A2-210ENST00000617564 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
COL4A2-210ENST00000617564 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
COL4A2-210ENST00000617564 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
COL4A2-210ENST00000617564 ST5P78524 1137 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
COL4A2-210ENST00000617564 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 ARFGEF2Q9Y6D5 1785 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
COL4A2-210ENST00000617564 DGKZQ13574 1117 aa16.11■□□□□ 0.17
COL4A2-210ENST00000617564 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
COL4A2-210ENST00000617564 NPHP1O15259 732 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 A1BGP04217 495 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 SRGNP10124 158 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 ECE1P42892 770 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
COL4A2-210ENST00000617564 MASTLQ96GX5 879 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 CAPNS2Q96L46 248 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 GPR101Q96P66 508 aaPredicted RBP16.1■□□□□ 0.17
COL4A2-210ENST00000617564 SCN4AP35499 1836 aa16.1■□□□□ 0.17
COL4A2-210ENST00000617564 BTBD11A6QL63 1104 aa16.09■□□□□ 0.17
COL4A2-210ENST00000617564 RGL2O15211 777 aa16.09■□□□□ 0.17
COL4A2-210ENST00000617564 GRM1Q13255 1194 aa16.09■□□□□ 0.17
COL4A2-210ENST00000617564 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
COL4A2-210ENST00000617564 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
COL4A2-210ENST00000617564 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
COL4A2-210ENST00000617564 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
COL4A2-210ENST00000617564 PRKAR2BP31323 418 aa16.08■□□□□ 0.16
COL4A2-210ENST00000617564 CNTROBQ8N137 903 aa16.08■□□□□ 0.16
COL4A2-210ENST00000617564 CCDC24Q8N4L8 307 aa16.08■□□□□ 0.16
COL4A2-210ENST00000617564 L3MBTL3Q96JM7 780 aaPredicted RBP16.08■□□□□ 0.16
COL4A2-210ENST00000617564 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
COL4A2-210ENST00000617564 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
COL4A2-210ENST00000617564 SLX4Q8IY92 1834 aa16.08■□□□□ 0.16
COL4A2-210ENST00000617564 SOX10P56693 466 aa16.07■□□□□ 0.16
COL4A2-210ENST00000617564 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
COL4A2-210ENST00000617564 LTBP1Q14766 1721 aa16.07■□□□□ 0.16
COL4A2-210ENST00000617564 KCNQ3O43525 872 aa16.06■□□□□ 0.16
COL4A2-210ENST00000617564 CA12O43570 354 aa16.06■□□□□ 0.16
COL4A2-210ENST00000617564 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
COL4A2-210ENST00000617564 MAP1SQ66K74 1059 aaPredicted RBP16.06■□□□□ 0.16
COL4A2-210ENST00000617564 CYP4F22Q6NT55 531 aa16.06■□□□□ 0.16
COL4A2-210ENST00000617564 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
COL4A2-210ENST00000617564 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
COL4A2-210ENST00000617564 SNRPA1P09661 255 aaKnown RBP16.05■□□□□ 0.16
COL4A2-210ENST00000617564 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-210ENST00000617564 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
COL4A2-210ENST00000617564 USP16Q9Y5T5 823 aa16.05■□□□□ 0.16
COL4A2-210ENST00000617564 CACNA1SQ13698 1873 aa16.05■□□□□ 0.16
COL4A2-210ENST00000617564 NPR1P16066 1061 aa16.04■□□□□ 0.16
COL4A2-210ENST00000617564 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-210ENST00000617564 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
COL4A2-210ENST00000617564 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
COL4A2-210ENST00000617564 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL4A2-210ENST00000617564 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
COL4A2-210ENST00000617564 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
COL4A2-210ENST00000617564 EPHX2P34913 555 aa16.03■□□□□ 0.16
COL4A2-210ENST00000617564 GCC1Q96CN9 775 aa16.03■□□□□ 0.16
COL4A2-210ENST00000617564 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
COL4A2-210ENST00000617564 MAP2K2P36507 400 aa16.02■□□□□ 0.16
COL4A2-210ENST00000617564 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL4A2-210ENST00000617564 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
COL4A2-210ENST00000617564 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
COL4A2-210ENST00000617564 PRAMEF22A3QJZ6 481 aa16.01■□□□□ 0.15
COL4A2-210ENST00000617564 AOC2O75106 756 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms