RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 C21orf2O43822 256 aa19.55■□□□□ 0.72
UBXN1-218ENST00000616865 CAMTA2O94983 1202 aa19.55■□□□□ 0.72
UBXN1-218ENST00000616865 CCDC24Q8N4L8 307 aa19.55■□□□□ 0.72
UBXN1-218ENST00000616865 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
UBXN1-218ENST00000616865 SLX4Q8IY92 1834 aa19.55■□□□□ 0.72
UBXN1-218ENST00000616865 PCNTO95613 3336 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 KCNQ3O43525 872 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 A1BGP04217 495 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 PRKAR2BP31323 418 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
UBXN1-218ENST00000616865 CNBD1Q8NA66 436 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 RSPH6AQ9H0K4 717 aa19.54■□□□□ 0.72
UBXN1-218ENST00000616865 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
UBXN1-218ENST00000616865 SETDB2Q96T68 719 aa19.53■□□□□ 0.72
UBXN1-218ENST00000616865 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
UBXN1-218ENST00000616865 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
UBXN1-218ENST00000616865 LTBP3Q9NS15 1303 aa19.52■□□□□ 0.72
UBXN1-218ENST00000616865 POTECB2RU33 542 aa19.52■□□□□ 0.72
UBXN1-218ENST00000616865 ST5P78524 1137 aa19.52■□□□□ 0.72
UBXN1-218ENST00000616865 ERFEQ4G0M1 354 aa19.52■□□□□ 0.72
UBXN1-218ENST00000616865 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
UBXN1-218ENST00000616865 DZIP3Q86Y13 1208 aaKnown RBP19.52■□□□□ 0.72
UBXN1-218ENST00000616865 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
UBXN1-218ENST00000616865 NPHP1O15259 732 aa19.51■□□□□ 0.71
UBXN1-218ENST00000616865 TAOK3Q9H2K8 898 aa19.51■□□□□ 0.71
UBXN1-218ENST00000616865 LAMB4A4D0S4 1761 aa19.51■□□□□ 0.71
UBXN1-218ENST00000616865 SRGNP10124 158 aa19.5■□□□□ 0.71
UBXN1-218ENST00000616865 STYK1Q6J9G0 422 aa19.5■□□□□ 0.71
UBXN1-218ENST00000616865 CNKSR1Q969H4 720 aa19.5■□□□□ 0.71
UBXN1-218ENST00000616865 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
UBXN1-218ENST00000616865 COL13A1Q5TAT6 717 aaPredicted RBP19.49■□□□□ 0.71
UBXN1-218ENST00000616865 PRPF40BQ6NWY9 871 aaKnown RBP19.49■□□□□ 0.71
UBXN1-218ENST00000616865 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
UBXN1-218ENST00000616865 PRAMEF22A3QJZ6 481 aa19.48■□□□□ 0.71
UBXN1-218ENST00000616865 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
UBXN1-218ENST00000616865 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
UBXN1-218ENST00000616865 MASTLQ96GX5 879 aa19.48■□□□□ 0.71
UBXN1-218ENST00000616865 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
UBXN1-218ENST00000616865 SNRPA1P09661 255 aaKnown RBP19.46■□□□□ 0.71
UBXN1-218ENST00000616865 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
UBXN1-218ENST00000616865 MCM10Q7L590 875 aa19.46■□□□□ 0.71
UBXN1-218ENST00000616865 RTF1Q92541 710 aaKnown RBP19.46■□□□□ 0.71
UBXN1-218ENST00000616865 ZNF652Q9Y2D9 606 aa19.46■□□□□ 0.71
UBXN1-218ENST00000616865 SCN4AP35499 1836 aa19.46■□□□□ 0.71
UBXN1-218ENST00000616865 NBPF5PQ86XG9 351 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-218ENST00000616865 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
UBXN1-218ENST00000616865 DLG5Q8TDM6 1919 aa19.43■□□□□ 0.7
UBXN1-218ENST00000616865 RGL2O15211 777 aa19.43■□□□□ 0.7
UBXN1-218ENST00000616865 DDNO94850 711 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-218ENST00000616865 HSPA1AP0DMV8 641 aaKnown RBP19.43■□□□□ 0.7
UBXN1-218ENST00000616865 HSPA1BP0DMV9 641 aaKnown RBP19.43■□□□□ 0.7
UBXN1-218ENST00000616865 CCDC93Q567U6 631 aa19.43■□□□□ 0.7
UBXN1-218ENST00000616865 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
UBXN1-218ENST00000616865 DCTN1Q14203 1278 aa19.42■□□□□ 0.7
UBXN1-218ENST00000616865 CHADLQ6NUI6 762 aa19.42■□□□□ 0.7
UBXN1-218ENST00000616865 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
UBXN1-218ENST00000616865 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
UBXN1-218ENST00000616865 C7orf43Q8WVR3 580 aa19.42■□□□□ 0.7
UBXN1-218ENST00000616865 PLEKHF1Q96S99 279 aa19.42■□□□□ 0.7
UBXN1-218ENST00000616865 KLRG2A4D1S0 409 aaPredicted RBP19.41■□□□□ 0.7
UBXN1-218ENST00000616865 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
UBXN1-218ENST00000616865 POTEIP0CG38 1075 aa19.41■□□□□ 0.7
UBXN1-218ENST00000616865 POTEJP0CG39 1038 aa19.41■□□□□ 0.7
UBXN1-218ENST00000616865 NPR1P16066 1061 aa19.41■□□□□ 0.7
UBXN1-218ENST00000616865 NIP7Q9Y221 180 aaKnown RBP eCLIP19.41■□□□□ 0.7
UBXN1-218ENST00000616865 IQCA1LA6NCM1 817 aa19.4■□□□□ 0.7
UBXN1-218ENST00000616865 TNS4Q8IZW8 715 aa19.4■□□□□ 0.7
UBXN1-218ENST00000616865 CREBZFQ9NS37 354 aa19.4■□□□□ 0.7
UBXN1-218ENST00000616865 NFE2L2Q16236 605 aa19.39■□□□□ 0.69
UBXN1-218ENST00000616865 TPTE2Q6XPS3 522 aa19.39■□□□□ 0.69
UBXN1-218ENST00000616865 L3MBTL3Q96JM7 780 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-218ENST00000616865 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.69
UBXN1-218ENST00000616865 NUP98P52948 1817 aa19.39■□□□□ 0.69
UBXN1-218ENST00000616865 APAF1O14727 1248 aa19.38■□□□□ 0.69
UBXN1-218ENST00000616865 FKBP4Q02790 459 aaKnown RBP eCLIP19.38■□□□□ 0.69
UBXN1-218ENST00000616865 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
UBXN1-218ENST00000616865 TAF7Q15545 349 aaPredicted RBP19.37■□□□□ 0.69
UBXN1-218ENST00000616865 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
UBXN1-218ENST00000616865 SNED1Q8TER0 1413 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 FAM177BA6PVY3 158 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
UBXN1-218ENST00000616865 RIPK4P57078 832 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 HLFQ16534 295 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 LDHDQ86WU2 507 aa19.36■□□□□ 0.69
UBXN1-218ENST00000616865 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-218ENST00000616865 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
UBXN1-218ENST00000616865 PASKQ96RG2 1323 aa19.35■□□□□ 0.69
UBXN1-218ENST00000616865 CAPN15O75808 1086 aa19.35■□□□□ 0.69
UBXN1-218ENST00000616865 LMOD3Q0VAK6 560 aa19.35■□□□□ 0.69
UBXN1-218ENST00000616865 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
UBXN1-218ENST00000616865 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
UBXN1-218ENST00000616865 ABCC12Q96J65 1359 aa19.34■□□□□ 0.69
UBXN1-218ENST00000616865 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
UBXN1-218ENST00000616865 MIS18AQ9NYP9 233 aa19.34■□□□□ 0.69
UBXN1-218ENST00000616865 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-218ENST00000616865 CNTNAP1P78357 1384 aa19.33■□□□□ 0.69
UBXN1-218ENST00000616865 RIC1Q4ADV7 1423 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms