RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 KDM4AO75164 1064 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 MAP3K11Q16584 847 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
EPHB4-210ENST00000616502 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
EPHB4-210ENST00000616502 TNNT1P13805 278 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 SYT1P21579 422 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 TPM3P06753 285 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
EPHB4-210ENST00000616502 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
EPHB4-210ENST00000616502 NRDCO43847 1150 aa17.03■□□□□ 0.32
EPHB4-210ENST00000616502 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
EPHB4-210ENST00000616502 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.03■□□□□ 0.32
EPHB4-210ENST00000616502 PPFIA3O75145 1194 aa17.03■□□□□ 0.32
EPHB4-210ENST00000616502 CFAP74Q9C0B2 1584 aa17.03■□□□□ 0.32
EPHB4-210ENST00000616502 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
EPHB4-210ENST00000616502 AK2P54819 239 aa17.03■□□□□ 0.32
EPHB4-210ENST00000616502 CLEC17AQ6ZS10 378 aa17.03■□□□□ 0.32
EPHB4-210ENST00000616502 FLT4P35916 1363 aa17.02■□□□□ 0.32
EPHB4-210ENST00000616502 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.32
EPHB4-210ENST00000616502 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
EPHB4-210ENST00000616502 TRMT1Q9NXH9 659 aaKnown RBP17.02■□□□□ 0.32
EPHB4-210ENST00000616502 ARHGAP31Q2M1Z3 1444 aa17.02■□□□□ 0.32
EPHB4-210ENST00000616502 CHL1O00533 1208 aa17.02■□□□□ 0.31
EPHB4-210ENST00000616502 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.31
EPHB4-210ENST00000616502 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.31
EPHB4-210ENST00000616502 PTPRCP08575 1304 aa17.02■□□□□ 0.31
EPHB4-210ENST00000616502 CYP2E1P05181 493 aaPredicted RBP17.01■□□□□ 0.31
EPHB4-210ENST00000616502 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 LUZP1Q86V48 1076 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 SPATA32Q96LK8 384 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
EPHB4-210ENST00000616502 CABP4P57796 275 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 LAMC1P11047 1609 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
EPHB4-210ENST00000616502 MAP3K2Q9Y2U5 619 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 MYO5BQ9ULV0 1848 aa17.01■□□□□ 0.31
EPHB4-210ENST00000616502 F13A1P00488 732 aa17■□□□□ 0.31
EPHB4-210ENST00000616502 AXIN2Q9Y2T1 843 aa17■□□□□ 0.31
EPHB4-210ENST00000616502 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
EPHB4-210ENST00000616502 TRERF1Q96PN7 1200 aa17■□□□□ 0.31
EPHB4-210ENST00000616502 CPS1P31327 1500 aa17■□□□□ 0.31
EPHB4-210ENST00000616502 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
EPHB4-210ENST00000616502 NEXNQ0ZGT2 675 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 HOMER1Q86YM7 354 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 DDX11Q96FC9 970 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 PYCARDQ9ULZ3 195 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 NDUFB9Q9Y6M9 179 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 SIGLEC1Q9BZZ2 1709 aa16.99■□□□□ 0.31
EPHB4-210ENST00000616502 SF3A1Q15459 793 aaKnown RBP16.98■□□□□ 0.31
EPHB4-210ENST00000616502 MYD88Q99836 296 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 RTL1A6NKG5 1358 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 ANAPC15P60006 121 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 TAF7LQ5H9L4 462 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 PROSER3Q2NL68 480 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 DNAJC2Q99543 621 aaKnown RBP16.98■□□□□ 0.31
EPHB4-210ENST00000616502 CLIP2Q9UDT6 1046 aa16.98■□□□□ 0.31
EPHB4-210ENST00000616502 RAB11FIP3O75154 756 aa16.97■□□□□ 0.31
EPHB4-210ENST00000616502 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
EPHB4-210ENST00000616502 DACT1Q9NYF0 836 aa16.97■□□□□ 0.31
EPHB4-210ENST00000616502 ANO6Q4KMQ2 910 aa16.97■□□□□ 0.31
EPHB4-210ENST00000616502 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
EPHB4-210ENST00000616502 TTC21AQ8NDW8 1320 aa16.97■□□□□ 0.31
EPHB4-210ENST00000616502 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
EPHB4-210ENST00000616502 LRMPQ12912 555 aa16.96■□□□□ 0.31
EPHB4-210ENST00000616502 CCAR2Q8N163 923 aaKnown RBP16.96■□□□□ 0.31
EPHB4-210ENST00000616502 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
EPHB4-210ENST00000616502 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
EPHB4-210ENST00000616502 ZNF165P49910 485 aa16.96■□□□□ 0.31
EPHB4-210ENST00000616502 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.31
EPHB4-210ENST00000616502 PDCP20941 246 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 BOLA2Q9H3K6 86 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 ZFYVE9O95405 1425 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 USP6P35125 1406 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 RNF20Q5VTR2 975 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 SDF4Q9BRK5 362 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 BRPF1P55201 1214 aaPredicted RBP16.95■□□□□ 0.3
EPHB4-210ENST00000616502 ATP2B3Q16720 1220 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 AACSQ86V21 672 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 IP6K1Q92551 441 aa16.95■□□□□ 0.3
EPHB4-210ENST00000616502 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
EPHB4-210ENST00000616502 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 CCDC73Q6ZRK6 1079 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 COPS6Q7L5N1 327 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 FAM200AQ8TCP9 573 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 DNAJC25Q9H1X3 360 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 TYRO3Q06418 890 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 RHPN1Q8TCX5 695 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
EPHB4-210ENST00000616502 TNNT3P45378 269 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms