RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 USP16Q9Y5T5 823 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 TCHHQ07283 1943 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 CASQ1P31415 396 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 FUCA2Q9BTY2 467 aa12.23□□□□□ -0.45
TNFAIP3-208ENST00000615468 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 LIG1P18858 919 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 GNAI1P63096 354 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 FAM193AP78312 1265 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 ST5P78524 1137 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 AK7Q96M32 723 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCDC69A6NI79 296 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 GJB2P29033 226 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 KRT85P78386 507 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 SKIDA1Q1XH10 827 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 PLEKHF1Q96S99 279 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 KRT24Q2M2I5 525 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 CCAR2Q8N163 923 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 TMEM87AQ8NBN3 555 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 KIF1BPQ96EK5 621 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 COG3Q96JB2 828 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 AMOTL2Q9Y2J4 779 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 LAMC1P11047 1609 aa12.22□□□□□ -0.45
TNFAIP3-208ENST00000615468 CPA1P15085 419 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 SMARCE1Q969G3 411 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 NRDCO43847 1150 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 ICE2Q659A1 982 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 CEP85Q6P2H3 762 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.45
TNFAIP3-208ENST00000615468 SEC31AO94979 1220 aaKnown RBP12.21□□□□□ -0.46
TNFAIP3-208ENST00000615468 CASTP20810 708 aaKnown RBP12.21□□□□□ -0.46
TNFAIP3-208ENST00000615468 MEIS3Q99687 375 aa12.21□□□□□ -0.46
TNFAIP3-208ENST00000615468 DEF6Q9H4E7 631 aa12.21□□□□□ -0.46
TNFAIP3-208ENST00000615468 SIGLEC1Q9BZZ2 1709 aa12.21□□□□□ -0.46
TNFAIP3-208ENST00000615468 RAD50Q92878 1312 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 ANAPC15P60006 121 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 KDM5AP29375 1690 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 RICTORQ6R327 1708 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 OAS2P29728 719 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 LARP1BQ659C4 914 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 LEKR1Q6ZMV7 388 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 AK2P54819 239 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
TNFAIP3-208ENST00000615468 POLKQ9UBT6 870 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 FHOD1Q9Y613 1164 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 MYCNP04198 464 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 PLA2G4AP47712 749 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 DHX37Q8IY37 1157 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 CCDC61Q9Y6R9 512 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 IQGAP1P46940 1657 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 ABCC4O15439 1325 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 URI1O94763 535 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 CHMLP26374 656 aa12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 RRP15Q9Y3B9 282 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-208ENST00000615468 NEMFO60524 1076 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 TTC31Q49AM3 519 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 NEXMIFQ5QGS0 1516 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 KIF2AO00139 706 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 CEBPZQ03701 1054 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 SART3Q15020 963 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 ZRSR1Q15695 479 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 TTC6Q86TZ1 520 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 GEMIN8Q9NWZ8 242 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 E2F4Q16254 413 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 NECAB1Q8N987 351 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 DNAI1Q9UI46 699 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 GLI2P10070 1586 aa12.18□□□□□ -0.46
TNFAIP3-208ENST00000615468 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 LRRN4CLQ8ND94 238 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 RGS12O14924 1447 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 A0A1B0GUL7 405 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 RPAP1Q9BWH6 1393 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-208ENST00000615468 ANKRD65E5RJM6 399 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 THEMISQ8N1K5 641 aaPredicted RBP12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 ADGRB1O14514 1584 aa12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 NOP2P46087 812 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 SMC1AQ14683 1233 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-208ENST00000615468 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms